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Name : LCAZH_1830 (LCAZH_1830) Accession : YP_003788896.1 Strain : Lactobacillus casei Zhang Genome accession: NC_014334 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 1787662 - 1788945 bp Length : 1284 bp Strand : - Note : - DNA sequence : ATGTTAGATCTAAAACTGATCCGGCAAAAACCGGAATGGGCCAAGGAAAAGTTAGCTGCACGTGCGATTAAAGGTGAAGA GATTGATGAATTATTAGCTTTGGATACGCGCCGGCGTCAGGTGACCGTTCAAACTGAAGAGCTTAAAGCCAAGCGCAATG ATGTTTCAGGCCAAATTGCGGTTATGAAACGTAACAAGGAAAATGGGGACGATCAAATTAAGAACATGCGGGAAGTAGGC CAAAAGATGGCGGCTTTAGACAAAGAACTCGCCCAGCTAAATGAAAAAGTAACCTATATTCTCGTCCGATTGCCAAACTT TCCGGCCGATGACGTACCAATGTCGTTAAATGAAGACGATTCCCGTGAAGAATACAAATGGGGAAACATGCCAACGTTTG ATTTTGAACCAAAGCATCACTGGGATATTGGTGAAAAATTAGGCATTCTGGATTTTGAACGCGCGGCAAAGGTTGCCGGT AGCAGATTTGTTTACTATAAGGGTGCTGGTGCACGTCTTGAACGCGCCGTCTATAACTTCTTCTTGGATGAGCACCAAAA AGAAGGGTATGAAGAAATCATTCCCCCATACCTCGTTAACAATGATTCTATGTTCGGTACTGGTCAATTTCCAAAGTTTA CTGATGCGACCTATACGATCACGAATGATGGTGAACCACTGACTCTGATTCCAACAGCAGAAGTGCCTCTGGTCAACTAT TATCGGAATGACATTATTGATGCTGAAAAACTTCCAGTTAATTTCACCGCACTTACACCGGCTTTTCGTTCTGAAGCTGG TAGTGCCGGTCGCGATACTCGCGGCTTGATCCGGATGCATCAATTTAATAAGGTCGAAATGGTCAAGTTCTGCAAGCCTG AAGATTCTTGGAAACAACTTCAAAACTTGATTCATGATGCCGAAGATCTTTTGCAAAAGCTCGGATTGCCTTATCATGTC ATCACGCTGGCAAGTAATGACGCTAGCTTCACCAGTGCGAAGACGAATGATCTGGAAGTCTGGATGCCAGCGCAAGATCG CTATCGTGAGATCTCAAGTTGCAGCAATTGCACTGATTTTCAGGCGCGTCGTGCACAAATTCGCTATCGTGATGACGACG GCAAATTGCAGTTTGTCCACACGCTCAATGGCTCAGGGCTTGCTGTAGGGCGAACAGTGGCTTCTATTTTGGAAAATTAT CAGCAAGCTGATGGTTCTGTGAAAATTCCCGATGTGCTTGTACCATACATGCAAGGACAAACCACAATCACCAAGGAAGA TTAA Protein sequence : MLDLKLIRQKPEWAKEKLAARAIKGEEIDELLALDTRRRQVTVQTEELKAKRNDVSGQIAVMKRNKENGDDQIKNMREVG QKMAALDKELAQLNEKVTYILVRLPNFPADDVPMSLNEDDSREEYKWGNMPTFDFEPKHHWDIGEKLGILDFERAAKVAG SRFVYYKGAGARLERAVYNFFLDEHQKEGYEEIIPPYLVNNDSMFGTGQFPKFTDATYTITNDGEPLTLIPTAEVPLVNY YRNDIIDAEKLPVNFTALTPAFRSEAGSAGRDTRGLIRMHQFNKVEMVKFCKPEDSWKQLQNLIHDAEDLLQKLGLPYHV ITLASNDASFTSAKTNDLEVWMPAQDRYREISSCSNCTDFQARRAQIRYRDDDGKLQFVHTLNGSGLAVGRTVASILENY QQADGSVKIPDVLVPYMQGQTTITKED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 6e-129 | 61 |
