Gene Information

Name : LCAZH_1355 (LCAZH_1355)
Accession : YP_003788439.1
Strain : Lactobacillus casei Zhang
Genome accession: NC_014334
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1322693 - 1323574 bp
Length : 882 bp
Strand : +
Note : -

DNA sequence :
ATGCATGGGTTGATCGCGGATTTTATTCATTATCTAAATGTTGAACGCGGATTGGCAAAAGCCACCCAAACTAGCTATCA
GCAGGATTTGATCACTTTTTCGGCTTGGCTAGCGGCCCGAAAAAGAAGGACATTTCCTGAGGAGTTCGGTACCATCCAGT
CCTTTTTAAAGGAGCAGAATGCCACCAAGGCGCCTGCTTCAGTTAGCCGCATGATTTCTGCTTTACGCAAGTTTTATCGG
TTTTTACTGCGTGAAGGGGCAATTTCAGCTGATCCAATGACCAAGATTGACACCCCAAAACGTGCCCAACATTTACCAGC
AACGTTGTCGAGTCAAGAAGTCGATGCTTTGATGGCCAAACCAGATACCGACAAGCCATTGGGATTACGTGATCGCGCTA
TTTTTGAGTTGATGTATGCCACTGGGTTACGGGTTTCAGAAGTTGTTGATTTACGTCTTGATCAATTGCATTTGGCAATG
AATCTACTTCAAGTGACTGGTAAAGGGGACAAAGAACGACTGGTTCCCATTAGTCCGCAAGCCACACAATGGGTGGATCG
CTATCTGCAAGAGGCCAGACCCAAATTACTCAAACGAGTACAACCTAAAAACGTTTTTGTCAATTTTCACGGTGGGCCAA
TGACTCGCCAAGGGATCTGGAAGAACCTCAAAGCATATATTGCAAGTATCGGCATTGAAAAAGATGTCACACCGCACACT
CTTCGTCACAGCTTTGCGACAAGGTTACTCGAAAACGGTGCTGACCTGCGCGTGGTTCAAGAACTACTCGGCCACAGCGA
CATCAGCACGACCCAGATTTACACCCATTTAAGCAATCAACATCTGGTTGCGGTCTATCATAAAACGCATCCGCGCGGGT
AG

Protein sequence :
MHGLIADFIHYLNVERGLAKATQTSYQQDLITFSAWLAARKRRTFPEEFGTIQSFLKEQNATKAPASVSRMISALRKFYR
FLLREGAISADPMTKIDTPKRAQHLPATLSSQEVDALMAKPDTDKPLGLRDRAIFELMYATGLRVSEVVDLRLDQLHLAM
NLLQVTGKGDKERLVPISPQATQWVDRYLQEARPKLLKRVQPKNVFVNFHGGPMTRQGIWKNLKAYIASIGIEKDVTPHT
LRHSFATRLLENGADLRVVQELLGHSDISTTQIYTHLSNQHLVAVYHKTHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 4e-59 45
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 4e-59 45