Gene Information

Name : cat (BP951000_0885)
Accession : YP_003785384.1
Strain : Brachyspira pilosicoli 95/1000
Genome accession: NC_014330
Putative virulence/resistance : Resistance
Product : chloramphenicol acetyltransferase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG4845
EC number : -
Position : 991571 - 992197 bp
Length : 627 bp
Strand : -
Note : -

DNA sequence :
ATGTTTAATATAATTGATATTGAAAATTGGGAGAGAAAAGAGCATTATTATCATTATTCTAATGTTAATCAATGCACTTA
TAGTATTACTTTAAAATTGGAAGTGTCAAATATAGTAAATAGTTCTTTTAAATTTTATCCTACAATTATATATTTAATAT
CAAAGACTGTAAACGATATAAAAGAGTTTAAGATGTCTTTTGAGGATTCTAAACTTGGCTATTATGATATTGTAAATCCA
AGCTATACTATATTTAATAATAATTTTAAAACTTTCTCATCTATATACACAGAGTATAATGATGATTTTAATTTGTTTTA
TAAAAATTGTATTGAAGATATAAAAACTTATAGTAAAAGCACATCATTTTCTCCAAAAGCTTGTAATATCAAAAATTTAT
TTAATATATCATCTATCCCTTGGGTATCTTTTGAGGGTTTTAATTTAAACATCAATAATTGTTTTGATTATTTGCCTCCA
ATATTTACTATAGGAAAATATTATAATGATTCTAATAAAATATTAATGCCTATTGCTATACAGGTTAATCATAGAGTTTG
CGACGGTTATCATGTAGGTTTATTTGCAGAAAGTTTGCAAGAAAATATTTTTAATCTAAAAAAATAG

Protein sequence :
MFNIIDIENWERKEHYYHYSNVNQCTYSITLKLEVSNIVNSSFKFYPTIIYLISKTVNDIKEFKMSFEDSKLGYYDIVNP
SYTIFNNNFKTFSSIYTEYNDDFNLFYKNCIEDIKTYSKSTSFSPKACNIKNLFNISSIPWVSFEGFNLNINNCFDYLPP
IFTIGKYYNDSNKILMPIAIQVNHRVCDGYHVGLFAESLQENIFNLKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cat YP_006098370.1 chloramphenicol acetyltransferase Not tested Tn2411 Protein 6e-41 41
cat CAJ77070.1 Chloramphenicol acetyltransferase Not tested AbaR1 Protein 4e-41 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cat YP_003785384.1 chloramphenicol acetyltransferase NC_010427.6155852.p0 Protein 2e-36 47
cat YP_003785384.1 chloramphenicol acetyltransferase NC_010426.6155849.p0 Protein 2e-36 47
cat YP_003785384.1 chloramphenicol acetyltransferase CP004022.1.gene799.p Protein 8e-43 45
cat YP_003785384.1 chloramphenicol acetyltransferase NC_010111.5787932.p0 Protein 2e-37 44
cat YP_003785384.1 chloramphenicol acetyltransferase CP001581.1.gene2168. Protein 1e-39 43
cat YP_003785384.1 chloramphenicol acetyltransferase NC_010410.6002590.p0 Protein 2e-41 41
cat YP_003785384.1 chloramphenicol acetyltransferase NC_011586.7045194.p0 Protein 2e-41 41
cat YP_003785384.1 chloramphenicol acetyltransferase NC_010558.1.6276004. Protein 2e-41 41