|
Name : serS (BP951000_0797) Accession : YP_003785296.1 Strain : Brachyspira pilosicoli 95/1000 Genome accession: NC_014330 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 890693 - 891973 bp Length : 1281 bp Strand : - Note : - DNA sequence : ATGATAGATGTAAAATTAATAAGAGAGAACATTGAATTAGTAGAAGAGAATTTAAGAAAGAGAAGGAGTAAAGTTTCTCT TGACAAATTAAAAGCTTTAGAACATGAGAGATTAGACCTTTTAAAAGAAGTAGAGCAAGACAGAGCTAAAAAAAATGAAT CTTCAAAAAAAGTCGGCGAATGTATGAAAGCCGGCAAAAAAGAAGAGGCAGAAAAAATAAAAGAAGAGATGAAAACATTT ACTGAATCCTTAAATAAAAAAGAAGAAAAATTAGCAGAATTAGAAGAGGCAGTTAATAACGAAATACTTTATTTGCCAAA TATGCTTTCTGAAGATGTACCTGATGGCGATGATGAGAAGGCAAACAAAGAAATAATAAGATGGGGAGAGCCTCGCAAGT TTGATTTTGAAGTAAAAGACCATGTGGATATAGCTGTAGGGCTTGATATACTTGACATTGAAAGAGCTGTAAGAATGGCT AGAACTCGTTTTTCACTTATGAAAGGAAAAGGAGCGGCATTAGAGAGAGCATTGATTAACTTTATGCTTAAGAAACATAC AAGCGAGCATGGTTATACAGAATATGTGCCTCCTATGCTTGTTAATGGCAGAACTATGACAGGTACTGGCCAGCTTCCAA AGTTTGAAGAGGATTTATTTAAAACTACAGATGACCCTGCTTTATACCTCATACCTACTGCAGAAGTTCCTCTTACAAAC ATATACAGAGAAGAGATTATACCAGAGAATATGCTTCCATTATATTGTACTGCTTATACACCATGTTTCCGTTCTGAGGC TGGTTCTTATGGTAAGGACATGAGAGGTTTAATAAGACAGCACCAATTTGACAAAGTTGAACTCGTAAAAATATGTGCTG CTGACAAGTCTAAAGAAGAACATGAGAAAATGCTTAAAGATGCTGAAAGTATTTTACAGGCATTAGAGCTTCCATATAGA GTAGTTGTTCTTTCTTCTGGAGATATAGGAAATGCTGCATACAAAACTTTTGATATAGAAGTTTGGCTTCCTTCACAAAA CATGTATAGAGAAATTTCAAGCGTAAGTAACTGTTGGGATTATCAGGCAAGAAGAATGCAGATGAGAACTAGAAGAAACG GTAAAACTGAATTAGTACACACATTAAATGGTTCTGGTATTGCTGTTGGAAGAACTTGGATAGCTATACTTGAAAATTAT CAGCAGGCAGACGGAAGCGTAATAATTCCAGATGCTTTAAGACCGTTTACTGGTTTCGACAAGATAGAAAAGGTTAATTA A Protein sequence : MIDVKLIRENIELVEENLRKRRSKVSLDKLKALEHERLDLLKEVEQDRAKKNESSKKVGECMKAGKKEEAEKIKEEMKTF TESLNKKEEKLAELEEAVNNEILYLPNMLSEDVPDGDDEKANKEIIRWGEPRKFDFEVKDHVDIAVGLDILDIERAVRMA RTRFSLMKGKGAALERALINFMLKKHTSEHGYTEYVPPMLVNGRTMTGTGQLPKFEEDLFKTTDDPALYLIPTAEVPLTN IYREEIIPENMLPLYCTAYTPCFRSEAGSYGKDMRGLIRQHQFDKVELVKICAADKSKEEHEKMLKDAESILQALELPYR VVVLSSGDIGNAAYKTFDIEVWLPSQNMYREISSVSNCWDYQARRMQMRTRRNGKTELVHTLNGSGIAVGRTWIAILENY QQADGSVIIPDALRPFTGFDKIEKVN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 6e-79 | 51 |
