Gene Information

Name : katA (BP951000_0277)
Accession : YP_003784785.1
Strain : Brachyspira pilosicoli 95/1000
Genome accession: NC_014330
Putative virulence/resistance : Unknown
Product : catalase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0753
EC number : -
Position : 308771 - 310222 bp
Length : 1452 bp
Strand : -
Note : -

DNA sequence :
ATGTCAGATAAAAAATTAACAACTGAATTTGGTGCCCCTGTAGAGAATAATCAACATTCTATGACAGCAGGTGCAAGAGG
ACCTATGTTGCTTCAAGATGTATGGTTTATGGAAAAGATGGCACATTTTGATAGAGAAGTTATACCAGAAAGAAGAATGC
ACGCTAAAGGTTCTGGGGCTTATGGTACATTTACAGTTACTCATGATATAACAAAATATACTAAAGCAAAAATATTCTCT
GAAGTTGGAAAGAAAACAGATTTATTTGTAAGATTTTCTACTGTAGCAGGTGAGAGGGGAGCTGCCGATGCTGAGAGAGA
TATAAGAGGATTTGCTATTAAGTTTTATACTGAAGAAGGAAACTGGGACTTGGTAGGAAACAATACTCCTGTATTTTATT
TTAGAGACCCTTTGAAATTCCCTGATTTGAACCATGCTGTAAAAAGAGACCCAAAAACTAATATGAGAAGTGCTCAAAAC
AAATGGGATTTCTTAACTTCACTTCCTGAAGCTATTCACCAAATAACTATAGATATGAGCGATAGAGGTATACCTTATAG
TTATAGGCATATGCATGGATTTAGCAGTCATGCTTATAGCTTTATAAACAAAGAAGGCAAAAGATATTGGGTAAAATTCC
ATTTCAAAACTCAACAAGGAATTAAAAACCTTACAGATGAAGAAGCTGCAGCAATAATAGCAAAAGACAGAGAAAGCTCT
CAAAAAGATTTGTTTGAAGCTATAGAAAGAGGCGACTTCCCTAAATGGGATATGAAAATTCAAATAATGACTGAAGAACA
AGCAAATGCTAGTAAAAGAAATCCATTTGACTTAACTAAAACTTGGTCGCAAAAAGAATATCCTCTAATTGATGTTGGTG
TTTTAGAATTAAATAGAAACCCTGAAAACTATTTCGCAGAAGTAGAACAATCAGCATTCAGCCCTTCTACAATAGTGCCA
GGTATTGGATTCTCACCAGACAGAATGCTTCAAGGAAGATTATTCTCATACACTGATACTCAAAGATATAGATTAGGTGT
AAATTATGCTAGTATACCAGTAAATGCTCCTAAGTTTAAAGCTAATACTTATCACAGAGACGGATACATGAGAGTAGAGT
CTAATGGTTCTAAAGTTGAATATGAACCAAACTCACAAGGTGAATGGAAAGAGCAAAGAGAATATGCTGAACCGCCTTTG
AAGATTTACGGTGATGCTTATAGATATGACCATAGAGAAGATGATGATGATTATTACACTGATGCAAGAGCTTTATTTAA
TCTTATGACAGATGCACAAAAACAAGTGTTGTTTGAAAATACAGCAAGAGATATGAATGGTGTTACTAAAGAAGTACAAT
TAAGACATATTAAAAACTGTATGAATGTTGATAAAGCTTATGGACTTGGGGTTGCCAAAGCATTAGGTTTTGATGAGAAG
GATATAAAATAA

Protein sequence :
MSDKKLTTEFGAPVENNQHSMTAGARGPMLLQDVWFMEKMAHFDREVIPERRMHAKGSGAYGTFTVTHDITKYTKAKIFS
EVGKKTDLFVRFSTVAGERGAADAERDIRGFAIKFYTEEGNWDLVGNNTPVFYFRDPLKFPDLNHAVKRDPKTNMRSAQN
KWDFLTSLPEAIHQITIDMSDRGIPYSYRHMHGFSSHAYSFINKEGKRYWVKFHFKTQQGIKNLTDEEAAAIIAKDRESS
QKDLFEAIERGDFPKWDMKIQIMTEEQANASKRNPFDLTKTWSQKEYPLIDVGVLELNRNPENYFAEVEQSAFSPSTIVP
GIGFSPDRMLQGRLFSYTDTQRYRLGVNYASIPVNAPKFKANTYHRDGYMRVESNGSKVEYEPNSQGEWKEQREYAEPPL
KIYGDAYRYDHREDDDDYYTDARALFNLMTDAQKQVLFENTARDMNGVTKEVQLRHIKNCMNVDKAYGLGVAKALGFDEK
DIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
katA ABD94664.1 catalase isozyme A Not tested ExoU island A Protein 9e-153 67
katA YP_005684630.1 catalase Not tested PiCp 3 Protein 6e-91 52
katA YP_005680448.1 catalase Not tested PiCp 3 Protein 6e-91 52
katA YP_005682539.1 catalase Not tested PiCp 3 Protein 6e-91 52
katA YP_003782575.1 catalase Not tested PiCp 3 Protein 6e-91 52