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Name : clpB (BP951000_2092) Accession : YP_003786570.1 Strain : Brachyspira pilosicoli 95/1000 Genome accession: NC_014330 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2298280 - 2300859 bp Length : 2580 bp Strand : - Note : - DNA sequence : ATGGATTATAATAAATATACAATAAAAGCCCAAGAGGCAGTAAATGAAGCTGCTAATATAGCTAATGGTGAAGACCATAA TGAAATAAAAAGCGAGCATTTACTTCTTGCATTATTAAAACAAGAGGACGGACTTATTCAGCCTTTAGTAGAAAGAATAG GCGTTCCTATAAATACGTTAATAGATAAAACTCAAAGATTAGTTGATGAAAACGTAAAGGTTACAGGTGAAAATGTGCAG TTACATTTGTCCACTAATGCTGGTAAAGTTTTAGCAAAAGCAGAAAAAGAAGCTAGTGCTTTAAAAGACCAATATGTATC AACAGAGCATATATTCTTAGCACTTGTTGAAGCTGACAACAAAGCAGGCGACATGCTTAGAAAAAGCGGAATAAGTAAAA AAGAAGTTTTAAGTGCATTAAAAGATTTAAGAAAAGGTCAAAGCGTAAATAGCCAAGACCCAGAAGCAAAAATGCAGGCA CTTGATAAATACTGCCGTGATTTAACAGCATTAGCAGAAGCAGAAAAAATTGACCCTGTTATAGGACGTGATGAAGAGAT AAGACGTGTTATGCAGGTGTTGTCAAGAAGAACAAAAAATAACCCTGTGCTTATAGGTGAGCCTGGTGTTGGTAAGACTG CTATTGTTGAAGGACTTGCAAGAAGAATAGTTTCTCAAGATGTACCTGAGGGACTTAAAGATAAAAGGCTATTAGCTTTA GATTTAGGAGCATTAGTAGCTGGTGCAAAATTCAGAGGAGAGTTTGAAGAGAGACTAAAAGCTGTTATCACAGAGATAGA AAAATCTGAAGGAAGCATTATATTATTTATAGATGAGCTTCACACACTTGTAGGAGCTGGTGCTACAGAGGGAGCAATGG ACGCTTCTAACCTATTAAAACCTGCATTAGCAAGAGGCGAATTAAGAGCAATAGGTGCTACTACTTTAGATGAATATAGA AAATATATTGAAAAAGATAAAGCACTTGAGAGAAGATTCCAACAAGTTTATTGTAAAGAGCCTAGTGTTGAAGATACTAT TTCAATATTAAGAGGCTTAAAAGATAAATACGAAGTTCATCATGGTGTTAGAATAAAAGACGATGCATTAGTTGCTGCTG CTGTTTTATCTAACAGGTATATAACTAACAGATTCTTACCTGATAAAGCTATTGACTTGGTAGATGAAGCTGCAAGCCAA TTAAAAATAGAGATAGACAGTCAGCCTACTGAACTTGATAAAATTGAAAGAAAGATTTTACAGCTTAATATAGAAAAACA AGCTCTTTCAAAAGAAAATGATGCAGCATCTAAAGAGAGATTAGAAAAACTTGAAAAAGAATTATCTGAACTTTCTGAAG AACGCAATGCTATGAAACTTCAATGGGATAATGAAAAAGGAAGAATTGAAGAGACTAGAAAATTAAAAGAAGAACTTGAA GCTTTAAATATAAAAGAGACTCAATATACAAGAGAAGGTAATTTAGCAAAGGCTGCTGAAATAAAATATGGTAAAATACC AGAATTACAGAAAAAATTAGAAGAAGCAACTAAAGCTATGGAAGAAGCTAAAAACTCTGACAAGAAAGGTCTTTTAAGAG AAGAGATTTCTGAAGATGATATAGCTAGAGTAATATCTGTATGGACTGGAATACCTGTAAGTAAAATGCTTACAAGCGAA AAACAAAAATACTTACAGCTTGAAGAAGTATTACATAAGAGAGTTGTAGGACAAGATGAAGCAATCACTTCAGTTGCTGA TGCCATAAGAAGAAACAGAGCAGGACTTTCTGATGAAAATAAACCGCTTGGAAGTTTCTTATTTATAGGACCTACTGGAG TTGGTAAAACAGAGCTTGCTAAAACACTTGCTGATTTCTTGTTTAGCGATGAAAAAGCTTTAACAAGAATTGATATGAGT GAATATATGGAGAAGTTTTCTGTTACTAGACTTATAGGAGCTCCTCCTGGATATGTTGGTTATGATGAAGGTGGACAATT AACAGAAGCAGTTAGAAGAAGACCTTATTCTGTTATACTATTTGATGAGATAGAAAAAGCTCACCCTGATGTATTTAATG TTTTACTTCAGGTATTAGATGATGGAAGGCTTACTGACGGACAAGGAAGAATAGTAGATTTCAAAAATGCTATTATCATA ATGACAAGTAATTTAGGTTCTGACCTTATTCTTGAAGCTAATGATACTAATGATATCAAAGAAAAAATTCAAGAGTTACT AAAAATGTCATTTAGACCAGAGTTCTTAAACAGAATAGATGAGATAATAACATTTACTAGACTTGACAAAAAATACATTG CTGAGATAGTAAGAAATCAAATAGCAAGAGTTGCTAACAGACTTAAAGATAGAAGAATAACTTTAGATGTAAGCGATGAA GCTATAGACTATATTGCTGATATTGGTTATGACCCTCAGTTTGGAGCAAGACCATTAAAAAGAGCAATACAGAATTATAT AGAAAACCCACTAGCTAAAGAAATGTTAGCAGGAAAATATTTAGAAGGAGATACTATAAAGGTAAAAAAATCAGGAGACG GTTTGGTTTTTGAAAAATAA Protein sequence : MDYNKYTIKAQEAVNEAANIANGEDHNEIKSEHLLLALLKQEDGLIQPLVERIGVPINTLIDKTQRLVDENVKVTGENVQ LHLSTNAGKVLAKAEKEASALKDQYVSTEHIFLALVEADNKAGDMLRKSGISKKEVLSALKDLRKGQSVNSQDPEAKMQA LDKYCRDLTALAEAEKIDPVIGRDEEIRRVMQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVSQDVPEGLKDKRLLAL DLGALVAGAKFRGEFEERLKAVITEIEKSEGSIILFIDELHTLVGAGATEGAMDASNLLKPALARGELRAIGATTLDEYR KYIEKDKALERRFQQVYCKEPSVEDTISILRGLKDKYEVHHGVRIKDDALVAAAVLSNRYITNRFLPDKAIDLVDEAASQ LKIEIDSQPTELDKIERKILQLNIEKQALSKENDAASKERLEKLEKELSELSEERNAMKLQWDNEKGRIEETRKLKEELE ALNIKETQYTREGNLAKAAEIKYGKIPELQKKLEEATKAMEEAKNSDKKGLLREEISEDDIARVISVWTGIPVSKMLTSE KQKYLQLEEVLHKRVVGQDEAITSVADAIRRNRAGLSDENKPLGSFLFIGPTGVGKTELAKTLADFLFSDEKALTRIDMS EYMEKFSVTRLIGAPPGYVGYDEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRIVDFKNAIII MTSNLGSDLILEANDTNDIKEKIQELLKMSFRPEFLNRIDEIITFTRLDKKYIAEIVRNQIARVANRLKDRRITLDVSDE AIDYIADIGYDPQFGARPLKRAIQNYIENPLAKEMLAGKYLEGDTIKVKKSGDGLVFEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 9e-98 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_003786570.1 | ATP-dependent Clp protease ATP-binding subunit ClpB | VFG2084 | Protein | 2e-105 | 42 |
