Gene Information

Name : BP951000_1375 (BP951000_1375)
Accession : YP_003785863.1
Strain : Brachyspira pilosicoli 95/1000
Genome accession: NC_014330
Putative virulence/resistance : Virulence
Product : capsular polysaccharide biosynthesis protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1086
EC number : -
Position : 1506132 - 1507580 bp
Length : 1449 bp
Strand : -
Note : -

DNA sequence : 
ATGGATAAAAAAAATATTGTTATTATCGGAGCTGGCAATGCTGGAGAGACTCTTGCTTCTGAAATATTGACATCAGACGA
AAATAATGAATATAATATACTATGCTTTTTAGATGATGATGAAAACAAAAAAGAAATTAATATTTATAATCATACTATAA
AAGTTGAAGGAAAAGTTAAAGACATAGAAAAAATTATAAACAAATATAAAAATGACAATATAGAACTAGAAGAAATTATT
ATAGCAATACCTACACTTAAACAAAAAGAACTTCTTGAAATACTAGATATAATATATCCTACAGGCATAAAATATAAAAT
ACTCCCTTGCTTTTTTGAGATAATAAAAGGAAATGCTTCTATTAAAGATATTAGAAACATTGAACCATCAGATTTACTTG
GAAGAGAAGAGATTGGTTTTGATGAAAAAGAGATATCGGATTATTATAAAGATAAAACAATACTAGTTACAGGAGGTGGG
GGCTCTATAGGAAGCGAGCTTGTAAGACAGTTAGTAACTCTTCCTGTAAAAAAAGTAATGGCTTTAGATAATTCTGAAGG
TGCAATACATAGCCTTATAATGTCTTTAAATGATAGAAAAAATGAAAAAAACAAACATAAGTTTAAATATATTATATCTA
ATGTTAGAGATTATGTAAAAGTAGATAAAATATTAAAACAAGAAAATCCAGATATAATATTTCATGCAGCAGCACATAAG
CATCTGCCATTTATGGAAGAATATCCGGAAGAAGCAATAAAAAATAATATATTAGCAACAGAAAATATAGCTACATTAGC
AATCAAAAACAATATTAAAAACTTTATATTTATATCAACAGATAAAGCCGTTCGTCCAACATCACTTATGGGGGCAAGCA
AAAGAATATGCGAAAGAATGATAATGTCACTCTCGCATGAACAAAATATAACTAAGTTTAAGATAACAAGGTTTGGTAAT
GTTCTTGGAAGCAGCGGAAGTGTAATACCTGTATTTGAAAGGCAGATTAGAGAAGGAAAACCTCTAACAGTTACGCACCC
AGAAATGGTTAGATTTTTTATGTCAATAAGAGAAGCAGCAAGACTAGTAATAAAAGCTTGTACGCTTAATGATGGAGTTA
TATTTACTTTGGATATGGGTAAGCCTGTAAAAATATTAGATTTGGCAAAAAATATGCTTAAGATGTATGGTCTTACAGAA
AAAGATATTCCTATAATATTTACAGGTATAAGAGAAGGTGAAAAATTATACGAAGAGATTCTTATGGACGATGAAACTCT
AATACCTTCACAGTATAAAAAATTATTTATAGCTAAAGACCCTGTACAATGTTTAACACCAGAAGAGCGTAAAATAATGA
TTGATGCATTCGATATAGCCTCACTCGATGCCGATAAAGATACAATAAAATTGCTGATGAAAAGATATATAGAAGAATAT
ACAGGATAA

Protein sequence : 
MDKKNIVIIGAGNAGETLASEILTSDENNEYNILCFLDDDENKKEINIYNHTIKVEGKVKDIEKIINKYKNDNIELEEII
IAIPTLKQKELLEILDIIYPTGIKYKILPCFFEIIKGNASIKDIRNIEPSDLLGREEIGFDEKEISDYYKDKTILVTGGG
GSIGSELVRQLVTLPVKKVMALDNSEGAIHSLIMSLNDRKNEKNKHKFKYIISNVRDYVKVDKILKQENPDIIFHAAAHK
HLPFMEEYPEEAIKNNILATENIATLAIKNNIKNFIFISTDKAVRPTSLMGASKRICERMIMSLSHEQNITKFKITRFGN
VLGSSGSVIPVFERQIREGKPLTVTHPEMVRFFMSIREAARLVIKACTLNDGVIFTLDMGKPVKILDLAKNMLKMYGLTE
KDIPIIFTGIREGEKLYEEILMDDETLIPSQYKKLFIAKDPVQCLTPEERKIMIDAFDIASLDADKDTIKLLMKRYIEEY
TG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 1e-69 44
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 5e-65 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BP951000_1375 YP_003785863.1 capsular polysaccharide biosynthesis protein VFG1300 Protein 1e-68 44