Gene Information

Name : fagD (cpfrc_00033)
Accession : YP_003782433.1
Strain : Corynebacterium pseudotuberculosis FRC41
Genome accession: NC_014329
Putative virulence/resistance : Virulence
Product : iron-siderophore binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0614
EC number : -
Position : 28112 - 29116 bp
Length : 1005 bp
Strand : +
Note : ABC-type Fe3+-hydroxamate transport system, periplasmic component

DNA sequence :
ATGCTGGCTCTTTTCCTTTCAATTTCCCTCATCTTTTCATTGGCCGCATGCTCATCCGAAGAAAAACAATCCAAGGATGC
TGGACAAGGTAATGCTGACGTAGCCACCGGTGGTGCACACTTCTCCACGGCTGATGCAGAAACTGCAAAGCTCGGTAGCG
ACGCAGCTCCAGGTGAGTTCCCTCGTACTGTTAAGCACGCTTTGGGTGAGACCGAGATCAAGGAACAGCCTAAACGTGTG
GTTGTTTTGGATACCGGTGAACTAGATAGCGTCCTTTCCCTAGGTATCACCCCTGTGGGAATGGTGACTACTAAGGGAGC
AAACCCTGTCCCAAGTTATCTTGCAGACAAAGTAAAAGACGTTAAAAGCGTAGGAACGATCAACGAGATCAATGTAGAAG
AGATTGCTGCTTTGCAGCCTGATCTGATCCTGGGCAGTAAACTGCGCGCAGACAAAATTTATGCTCAGCTCGCAGAAGTC
GCACCAACTGTCTTCTCCATCCGTCCTGGATTCCCTTGGAAAGAAAACTTCCTTCTCATTGGCGATGCTCTAGGTAAAGA
GAAAGAAGCAGAGGCAAAGCTGAACGAGTACACCGAAAAGGTTGAGACCATCAAGGCCTCCGTGCCAGCAGATACCACGG
TCTCCCTTCTTCGTTTCATGCCTAAGCGTATTCGCCTTTATGGCAACAAGTCTCTCCTCGGTGTAATTCTTAAAGACGCA
GGCCTTGCCCGTCCGGAGAATCAGAACATTGATGAGCTGGCTACTGAAATCTCTCCTGAGACTATCGACCAGGCAGAGGG
AAGCGTGATCTTCTACAGTAGCTACGGCAAGCCTGATGCGACCGGCCAAGATGCCATTGTCAATGGCGCTGCGTGGAAGA
ACCTTAACGCGGTGAAGAATGGTCAGGCGCATGAGGTTAATGACGACGTATGGTTCCTAGGCCTTGGGCCCACCGGTGCT
ATGCAGATCGTGGAAGAACTCAAAGAACTGCTCCCCAAGAAGTAG

Protein sequence :
MLALFLSISLIFSLAACSSEEKQSKDAGQGNADVATGGAHFSTADAETAKLGSDAAPGEFPRTVKHALGETEIKEQPKRV
VVLDTGELDSVLSLGITPVGMVTTKGANPVPSYLADKVKDVKSVGTINEINVEEIAALQPDLILGSKLRADKIYAQLAEV
APTVFSIRPGFPWKENFLLIGDALGKEKEAEAKLNEYTEKVETIKASVPADTTVSLLRFMPKRIRLYGNKSLLGVILKDA
GLARPENQNIDELATEISPETIDQAEGSVIFYSSYGKPDATGQDAIVNGAAWKNLNAVKNGQAHEVNDDVWFLGLGPTGA
MQIVEELKELLPKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagD YP_003782433.1 iron-siderophore binding protein Virulence PiCp 1 Protein 2e-143 100
fagD YP_005680310.1 Iron siderophore binding protein Not tested PiCp 1 Protein 2e-143 100
fagD YP_005682400.1 Iron siderophore binding protein Virulence PiCp 1 Protein 2e-143 100
fagD YP_005684491.1 Iron siderophore binding protein Virulence PiCp 1 Protein 2e-143 100