Gene Information

Name : lysX (cpfrc_01931)
Accession : YP_003784331.1
Strain : Corynebacterium pseudotuberculosis FRC41
Genome accession: NC_014329
Putative virulence/resistance : Unknown
Product : lysyl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : 6.1.1.6
Position : 2117726 - 2120977 bp
Length : 3252 bp
Strand : +
Note : -

DNA sequence :
ATGTTGCATATTATCGATTGCATGCAGAAACACTGGGAAACCCGAGTAATCCTTTTTACAGCACAGTTAGCCACTATCTG
GCTGATTATTGGACTGATACTAAAATATATAAACATTAATCTCATTAGGGATATTAGTTTTGGTTTTTTCTTAATCGGCC
TCCCCAACTTCCCCACTCTATTTATCACCATCCTCATGGTCTTACTCACATCGGGGATGCTGCGCGGGCACCGAGGGGCG
TTGCTGTTTTATCTTCTGGGATTCCAGGTGCCGGATCTGCTTTCTGGCATCTTGTTCTTCGTCTTGGGTCTCTTCAACGA
TCCCGAGATTACCGGTGATAATGCCAAGTACACGATTATCGCGTTCGCAGTTTCCACGCTGTTTTCTCTGTTCTATCTTG
TTTGCGGATACCGCGCGCTTAAAGACTTCCCAGCTCGCGTTGTTGGTTCCTGGGTGCGGGCTCTCAGCACGCTCATCGTT
GGCCTCATTATCTCGTTTGTTGTGATGTGGGGTGTGCTGGTCTTGCAGGAGCATCAAGACAGCAGCATAGCGGCAGCCTG
GTCTTTCTTCACTGCCATCGGCCTCAGTCCTTCAGAACCGCCTTTCCCAACTGAGCTGCATAGCCCGCACTTTATCCGGG
TTATCGGTGGCATCCTTTCCTCCGTGGCGCTCTTTGCCGCCATCGCTATTCTCTTTGGTTCGCGCAGGCATGATGCAGCA
ACGGCTGAGGAACAGCTTCTTACGCGTAAGTTACTGCTTAATCCCCCGTCGCCGGATTCACTCGCTTATTTTTCCACTCG
CTATGACCGCAGCTTGATCACCTCCCCGGATGAAAAGGCTGCCGTGTCCTTCCGCGTTGTCGACGGTGTATGCCTTGCCG
CTGGTGACCCCCTCGGTGATCCAGAATCCTGGCCTGCGGCTGTGGAAAACTGGCGTGAGCATAGCCGTAAGAACGGTTGG
GTTCTCGGTGCTGCTTCTGTCTCAGAAGCCGGCGCGAAAGCTTATGCTGCTGCAGGCATGAGCGTGATTACGCTTGGTGA
TGAGGCAGTAGTAGACGCAGAGAACTTCCATCTCAAGAATATGCCGGAGGTTCGCAAGGAGATAGCCGGACCGCGTAAAG
CTGGCTATACCGTCCGGGTGCAGCGTCAGTCGCAGATCCCCGCTGAAGAGCTTCAGCATCTCTCCCAGCTCGCTGAAGCT
TGGCGACGCGGCGACGAACGCGGATTCACCATGGCGTCTGGCCGCATCGGCGATCCCCGTGACTCGCGTACTGTCATAGT
AACCGCCCACGATGCTGACGATAACGTCATGGGCCTGCTCTCCTTTGTTCCGTGGGGACGCCGTGGGCTTTCCCTTGACG
TTATGCGCCGCAATCCTGATGCCGTCGGCGGTGTCACAGAGTTTATGGTGGTTGGTCTGGCGCAGGAAGCCGGCAACCTT
GGAATATCCAAGTTTTCCCTAAACTTTGTTACCTTCCGCGAAGCTCTCGATCGTGGTACCTATGTAGCGGCTTCCCTGAG
GGAGCGGCTGCTGCTCAAACTGCTTCTCCTGTCTTCTCGCTGGTGGCAGATCCAATCGTTGTACCAATCCAACGTCAAGT
ATCATCCGCAATGGCAGTCGCGCTTCCTATGCATTGATCATGGATTCCACACGGCCCGCGTCCTTATTGCTTTTGCTAGC
GCCGAGGGTTTCTTGCCTTGGATGAAGGAATATGGGTCTCCTGTGGGCGACCCTCAGGAGATCGCCGCGCTTGAATCCGC
GGCTCTTATGCCGGCTATCGAGCCGCCAGCTTTATCGGCCCAAGAGCGCATGCGCAAGACAAAGCTGGAGGAGCTTGAGT
CACTCAGCATGAGCCCCTACCCGCCGGCTGTGCCTCGGACTACTTCTATTAAAGAATTGCTCGCAGCAGATGCGACCCAC
ACCGTTTCAGAAGCGCCGATCTCAGTCACCGGTAGAGTCGCTTTTATCCGTGATCATGGCGGAGTGGTCTTTGCGGATTT
GGTTGAGGAGCACACAAAGCTCCAGCTAGTGATTGAGCGCAGTGCAGGACAGACGATGACCTTGTTTAAGCACTTGGTCA
GCCGCGGTGACCTCATTTCTGCCACAGGTCAGTTGGGGGAGTCTCGCAACGGTACTCGTTCCCTCATTGTCTCTTCCTGG
GATATGGCCGCTAAATCGCTTACGCCGATGCCTCGCGTCCCGCTCAGCAACCCGCACTTGCGGGCAAAGTTCCGCCACAT
GGACTTTGCGCTTAATAAAAAAGCTACGGATATCTTCCTTGCCCGTTCCAAGGCCGTCAGCGCAGTACGCTCCGTGCTGC
AAGAGCAGGGCTATATGGAAGCCGAAACCCCCATTCTGCAGACCATCCATGGTGGTGCAAATGCTCGCCCCTTCAGGACT
CATATCCGAGCATACGATCAAAACCTCACGCTCAGGATCGCGCCCGAGCTGTACCTCAAGCGCCTGGTGGTCGGCGGCAT
CCCTCGTGTCTTTGAGATAGGAAGGAACTTCCGTAACGAGGGCGTGGATTCCACCCACAACCCCGAGTTCACGTCGCTGG
AGGCCTACCAGTCTTATGGCAACTGGGACACCATGCGGGTGCTTACAGAAGAGCTGATTCGTTCCGCAGCAATCGCCGTC
TACGGGAAGCCAGAGGTGACTACGGCGGACGGACAGATCCTTGATCTCACCGGATCCTGGCCTGTTGTTCCTGTGTATGA
TGCGGTGTCTGAGGCCGTCGGCAAGCATATTTCCCCAGACGCAGATGTTTCCGAATATGCAGACATCGCGGAGAAATACG
GCATCACCGCCGCCACCGTGGGTGATCTGGTCAACGAGCTTTACGACGAACTCATCGAACCCAACACCGTCTTCCCCACC
TTCTACGCTGGATTCCCGGTGGAGACTTCGCCGCTCACAATGGCAGATCCAGATCAGCCGCGCATCGCCCAGCGTTGGGA
CCTTGTAGCCTGCGGGATGGAGCTAGGCACCGCCTACACAGAGCTCGCGGACCCGCTGGAACAATACGCTCGTCTTTCCG
ATCAGTCTCTACGCGCCGCTGGCGGCGACGCCGAGGCAATGGAATTGGATGAGAACTTCCTCAAGGCGCTGCAGTTTGGC
ATGCCGCCCACAGGCGGCCTAGGAATCGGAATTGATCGCTTGGTCATGTTCCTCACCGGCCAAAACATCCGCGAAGTTCT
CTCCTTCCCCTTTGTCAGACCAGATACGGACGGATCAGCTCGGGGTTGTTAA

Protein sequence :
MLHIIDCMQKHWETRVILFTAQLATIWLIIGLILKYININLIRDISFGFFLIGLPNFPTLFITILMVLLTSGMLRGHRGA
LLFYLLGFQVPDLLSGILFFVLGLFNDPEITGDNAKYTIIAFAVSTLFSLFYLVCGYRALKDFPARVVGSWVRALSTLIV
GLIISFVVMWGVLVLQEHQDSSIAAAWSFFTAIGLSPSEPPFPTELHSPHFIRVIGGILSSVALFAAIAILFGSRRHDAA
TAEEQLLTRKLLLNPPSPDSLAYFSTRYDRSLITSPDEKAAVSFRVVDGVCLAAGDPLGDPESWPAAVENWREHSRKNGW
VLGAASVSEAGAKAYAAAGMSVITLGDEAVVDAENFHLKNMPEVRKEIAGPRKAGYTVRVQRQSQIPAEELQHLSQLAEA
WRRGDERGFTMASGRIGDPRDSRTVIVTAHDADDNVMGLLSFVPWGRRGLSLDVMRRNPDAVGGVTEFMVVGLAQEAGNL
GISKFSLNFVTFREALDRGTYVAASLRERLLLKLLLLSSRWWQIQSLYQSNVKYHPQWQSRFLCIDHGFHTARVLIAFAS
AEGFLPWMKEYGSPVGDPQEIAALESAALMPAIEPPALSAQERMRKTKLEELESLSMSPYPPAVPRTTSIKELLAADATH
TVSEAPISVTGRVAFIRDHGGVVFADLVEEHTKLQLVIERSAGQTMTLFKHLVSRGDLISATGQLGESRNGTRSLIVSSW
DMAAKSLTPMPRVPLSNPHLRAKFRHMDFALNKKATDIFLARSKAVSAVRSVLQEQGYMEAETPILQTIHGGANARPFRT
HIRAYDQNLTLRIAPELYLKRLVVGGIPRVFEIGRNFRNEGVDSTHNPEFTSLEAYQSYGNWDTMRVLTEELIRSAAIAV
YGKPEVTTADGQILDLTGSWPVVPVYDAVSEAVGKHISPDADVSEYADIAEKYGITAATVGDLVNELYDELIEPNTVFPT
FYAGFPVETSPLTMADPDQPRIAQRWDLVACGMELGTAYTELADPLEQYARLSDQSLRAAGGDAEAMELDENFLKALQFG
MPPTGGLGIGIDRLVMFLTGQNIREVLSFPFVRPDTDGSARGC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lysS1 YP_005684273.1 lysyl-tRNA synthetase Not tested PiCp 7 Protein 0.0 100
lysX YP_003784331.1 lysyl-tRNA synthetase Not tested PiCp 7 Protein 0.0 100
lysS1 YP_005686365.1 lysyl-tRNA synthetase Not tested PiCp 7 Protein 0.0 100
lysS1 YP_005682181.1 lysyl-tRNA synthetase Not tested PiCp 7 Protein 0.0 99