Gene Information

Name : cpfrc_01918 (cpfrc_01918)
Accession : YP_003784318.1
Strain : Corynebacterium pseudotuberculosis FRC41
Genome accession: NC_014329
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 2104042 - 2104836 bp
Length : 795 bp
Strand : -
Note : ABC-type sugar transport systems, ATPase components

DNA sequence : 
GTGGAAGAAAGGAAAGAAATAACCTTGATACATCTCAGAAATGTCGGCGTGAGTTATGGCAGCACTTCTGCAGTGCACCG
AGTGAGCGCTACGGTGCAACCAGGCACGATTACGGCCTTGGTCGGGCCCAACGGCAGCGGGAAATCTACGTTGTTAAATG
CGGTGGCGGGAGTTGTACCTTTTAGCGGTGAGGTTGTCTTTGGAGGTAATCCTCTCGCCGGTATGTCGGCTCGGCAGCGA
GTGGAGACCGTGGCCTATGTTCCGCAGGTGGCCACGCTTAACGGGGACATGGCGGTGATTGATTTTGTGGGGCTGGGTGC
TGTTGCCGGCAGAGGAATATTTCACCGTAAGACTAGGCAGGATCATGACCGGGTTTTTCATGCGTTAGAGCTGCTTGGGC
TAGAAAAATTAGCTGAACGTCAGTGGAGCGAGCTGTCTGGTGGACAGCGGCAGCGCGTCTCTATCGCACGTGGGCTGGCA
CAAGGCTCACGCGTATTGCTTCTCGACGAACCAACCAATCATTTGGATATCGAGCATCAGCTGACTTTAATGCGGGTTTT
GCATCGTTTGGTCACCGAGGAGGGACTCACTGTGGTGGCGGTTATGCATGACTTGGGGCTGGTGGCACGATATGCTGATA
CTGCTCTGATACTGCACTCTGGACATTGTGTCGCAGAGGGGCCGGTAGACAGTGTTTTATCGTCACGCAATATTGCTGAG
TTTTTTAATGTAGAGGCAGAGATTCTCCGTTCTCCCGAAGGCGCCGCTGCCTTGCTGGCGGCTGCCCCGAGATAA

Protein sequence : 
MEERKEITLIHLRNVGVSYGSTSAVHRVSATVQPGTITALVGPNGSGKSTLLNAVAGVVPFSGEVVFGGNPLAGMSARQR
VETVAYVPQVATLNGDMAVIDFVGLGAVAGRGIFHRKTRQDHDRVFHALELLGLEKLAERQWSELSGGQRQRVSIARGLA
QGSRVLLLDEPTNHLDIEHQLTLMRVLHRLVTEEGLTVVAVMHDLGLVARYADTALILHSGHCVAEGPVDSVLSSRNIAE
FFNVEAEILRSPEGAAALLAAAPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01918 YP_003784318.1 hypothetical protein Not tested PiCp 7 Protein 1e-109 100
phuC YP_005686351.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 7e-105 99
phuC YP_005682167.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 3e-105 99
phuC YP_005684259.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 3e-105 99
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 9e-31 42
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 5e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cpfrc_01918 YP_003784318.1 hypothetical protein BAC0164 Protein 5e-31 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cpfrc_01918 YP_003784318.1 hypothetical protein VFG1042 Protein 5e-31 42