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Name : clpB1 (cpfrc_01876) Accession : YP_003784276.1 Strain : Corynebacterium pseudotuberculosis FRC41 Genome accession: NC_014329 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : 3.4.21.92 Position : 2053289 - 2055838 bp Length : 2550 bp Strand : - Note : ATPases with chaperone activity, ATP-binding subunit DNA sequence : ATGAATTCATTTAACCCAACAACTAAAACTCAGGAGGCCTTGCAAGTTGCACTGCAGCAGGCGTCTTCCTTAGGAAACCC AGATATTCGGCCAGCACATTTACTTGCGGCGATCTTAGGCCAGGAGGACGGCATCGCCGTGCCCGTCTTGCGCGCTACGG GCGTAGACCCACAGGTGGTGGCCAAGGAGGCCAATGCACTTGTAGCGGGGTATCCCAAGGCTGAGGGGTCTGGCATGGCC AACCCCAACTTTAACCGCGATGCTCTCAACGCTCTGACCGCTGCGCAAGAGCTGGCTGGTGAATTAGGTGATGAGTACGT ATCTACTGAGGTGCTACTCGCCGCGATTGCTCGGGGTAAGTCCGATGCTGCGGAGTTACTGACCAAGCGAGGCGCTACGT ATGACGTGATTAAGGGAGTGTTCCCCTCTGTGCGAGGAAGCAAGAAGGTGACTAGTCAGGATCCGGAAGGCCAGTTCCAA GCTCTGGAGAAGTATTCCACCGACCTTACGGCTCGTGCTCGTGAGGGAAAGATTGATCCCGTTATCGGGCGTGACTCGGA GATTCGGCGTGTGGTTCAGGTGCTCAGCCGTCGCACTAAGAATAACCCCGTTCTTATTGGTGAGCCTGGCGTGGGTAAGA CCGCGATCGTAGAAGGCCTGGCTCGCAGGATTGTTGCCGGCGATGTTCCGGAGTCGCTGAAGGGGAAGACCCTTATTAGC CTTGATCTTGGATCGATGGTCGCTGGCGCCAAGTACCGTGGCGAGTTTGAGGAACGCCTCAAGGCTGTGCTTGATGAGAT CAAGTCGGCAGAGGGCGAGATCATTACTTTTATTGATGAGCTGCACACCATTGTTGGTGCAGGAGCTACGGGCGATTCCG CTATGGACGCCGGCAATATGATCAAGCCACTGCTGGCTCGTGGCGAGCTACGCCTAGTGGGTGCCACTACTCTGGATGAA TACCGCAAGTACATCGAGAAAGATGCGGCCTTGGAACGCCGTTTCCAGCAGGTCTTTGTGGGCGAACCCTCTGTAGAAGA CGCTATCGGTATTCTGCGCGGCCTTAAAGAGCGCTACGAGGTGCATCATGGTGTGCGTATTCAGGATTCCGCATTGGTCG CCGCTGCCACTCTCTCGGATCGCTATATCACGTCTCGCTTCCTACCGGACAAAGCAATTGACCTGGTCGATGAGGCCGCG AGCCGCCTGCGCATGGAGATCGATTCTTCCCCGCAAGAGATCGATGAGCTAGAGCGTGTTGTGCGTCGCCTGGAGATTGA AGAAGTCGCACTGAGCAAGGAGACGGATGCGGCCTCTCAGCAGCGCCTGGAGAAGTTGCGCCAGGAGCTTGCCGACGAGC GCGAGAAACTCGGCGAACTCAAAGCCCGCTGGAATAATGAGAAGTCTGCAATAGATAAGGTGCGCGAGGCCAAGGAAGAG CTAGAGCATCTGCGCTCTGAGTCGGAGATTGCTGAGCGCGAAGGCGACTACGGCAAGGTGGCGGAGCTGCGCTATGGCCG AATCCCAGAGTTGGAAAAGCAGGTGGCTGAGGCTGAGGCCCATACAACTGAGACCACTATGCTTTCGGAGGAGGTAACAC CGGACACCATCGCTGATGTGGTTTCTGCTTGGACTGGTATCCCTGCGGGCAAGATGTTGCAGGGGGAGACGGAAAAGCTT CTGCGCATGGAATCTGAGCTGGGTAGCCGAGTGGTTGGGCAGCTAGAAGCCGTTGAAGCTGTGTCTGATGCTGTGCGCCG TGCGCGCGCTGGCGTAGCTGACCCGAACCGCCCGACTGGTTCCTTCCTTTTCCTTGGGCCTACGGGCGTGGGTAAGACTG AGCTGGCTAAAGCTTTGGCCGAGTTCATGTTTGATGACGAGCGCGCGATGGTGCGCATAGATATGTCTGAGTACGGGGAG AAGCATTCCGTGGCTCGACTTGTTGGTGCCCCTCCCGGATACGTTGGTTATGATCAAGGCGGTCAGCTCACCGAGGCTGT GCGGCGGCGTCCCTACACGGTGGTGCTTTTTGACGAGGTAGAGAAAGCACATTCCGATGTCTTTGACATTCTGCTGCAGG TACTCGATGAAGGCAGGCTTACCGACGGCCAAGGTCGTACCGTTGATTTCCGAAACACCGTGCTCATCCTCACCTCCAAC CTGGGGGCTGGCGGTACTCGCGAGCAAATGATGGATGCCGTCAAACGAGCATTCAAACCGGAATTTGTTAACCGCCTGGA TGACGTGGCGATCTTTGATCCGCTCTCAGAGGAGCAGCTCACTCATATTGTGGAGATCCAGATTGCTCAGCTGGCAAACC GACTTTCGGCTCGTCGCCTGACCTTGCAGGTCTCTGATGCTGCAAAGTTGTGGTTGGCTGAACGCGGTTATGAGCCCGCC TATGGCGCGCGTCCGCTGCGCCGTCTGATCCAACAGGCGATTGGTGATCAGCTGGCCAAGAAGCTGTTGGCAGGCGAGAT CCGCGACGGCGACACCGTGCACGTAGATGTAGCCGATGGCGGCGAGGCTTTAGAGTTGGCAAAGAGATAA Protein sequence : MNSFNPTTKTQEALQVALQQASSLGNPDIRPAHLLAAILGQEDGIAVPVLRATGVDPQVVAKEANALVAGYPKAEGSGMA NPNFNRDALNALTAAQELAGELGDEYVSTEVLLAAIARGKSDAAELLTKRGATYDVIKGVFPSVRGSKKVTSQDPEGQFQ ALEKYSTDLTARAREGKIDPVIGRDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLKGKTLIS LDLGSMVAGAKYRGEFEERLKAVLDEIKSAEGEIITFIDELHTIVGAGATGDSAMDAGNMIKPLLARGELRLVGATTLDE YRKYIEKDAALERRFQQVFVGEPSVEDAIGILRGLKERYEVHHGVRIQDSALVAAATLSDRYITSRFLPDKAIDLVDEAA SRLRMEIDSSPQEIDELERVVRRLEIEEVALSKETDAASQQRLEKLRQELADEREKLGELKARWNNEKSAIDKVREAKEE LEHLRSESEIAEREGDYGKVAELRYGRIPELEKQVAEAEAHTTETTMLSEEVTPDTIADVVSAWTGIPAGKMLQGETEKL LRMESELGSRVVGQLEAVEAVSDAVRRARAGVADPNRPTGSFLFLGPTGVGKTELAKALAEFMFDDERAMVRIDMSEYGE KHSVARLVGAPPGYVGYDQGGQLTEAVRRRPYTVVLFDEVEKAHSDVFDILLQVLDEGRLTDGQGRTVDFRNTVLILTSN LGAGGTREQMMDAVKRAFKPEFVNRLDDVAIFDPLSEEQLTHIVEIQIAQLANRLSARRLTLQVSDAAKLWLAERGYEPA YGARPLRRLIQQAIGDQLAKKLLAGEIRDGDTVHVDVADGGEALELAKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 6e-98 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 5e-98 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB1 | YP_003784276.1 | ATP-dependent Clp protease ATP-binding subunit | VFG2084 | Protein | 6e-106 | 43 |
| clpB1 | YP_003784276.1 | ATP-dependent Clp protease ATP-binding subunit | VFG2076 | Protein | 8e-109 | 41 |
