Gene Information

Name : sigC (cpfrc_00174)
Accession : YP_003782574.1
Strain : Corynebacterium pseudotuberculosis FRC41
Genome accession: NC_014329
Putative virulence/resistance : Unknown
Product : ECF family sigma factor C
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 183831 - 184394 bp
Length : 564 bp
Strand : -
Note : DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

DNA sequence :
ATGAAGAACTCGGAACGCGATGATCGCGTCACCCAACTGGCACTCGCTGCCGGCCGCGGCGACAAAACCGCGCTCACCGA
GTTCATCCGAGAGACCCAAAATGACGTCTGGCGCCTGCTCGCCCACCTAGGGGGCAGCGAAATCGCCGACGATCTCACCC
AAGAGACCTACCTCCGCGTCATGGGCGCCCTACCCCGCTTTGCGGCACGCTCATCGGCAAGAACATGGTTACTCTCACTC
GCACGCCGCGTATGGGTAGACAATATCCGTCATGACATGGCCCGCCCCCGCAAATCCTCCGCAGAAGTAGAGGACCTTGA
CCCCGCCGTGCTCTCCACCAATGGCGAAACCACCTGGTCCGACTGGATTGACGTCCGTTTGCTTATCGACGCCCTCCCTA
CCGAGCGTCGTGAAGCCCTCATTCTGACGCAAGTGCTCGGTTACTCCTACGAGGAAGCAGCAAAAATCGCCAACGTCCGC
ATCGGCACCATTCGCTCCCGCGTAGCTCGCGCGCGTGCCGACGTGATCGCAGCAGCCGGGCGCCCCAATGCAGCTAGCGC
CTAA

Protein sequence :
MKNSERDDRVTQLALAAGRGDKTALTEFIRETQNDVWRLLAHLGGSEIADDLTQETYLRVMGALPRFAARSSARTWLLSL
ARRVWVDNIRHDMARPRKSSAEVEDLDPAVLSTNGETTWSDWIDVRLLIDALPTERREALILTQVLGYSYEEAAKIANVR
IGTIRSRVARARADVIAAAGRPNAASA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sigC YP_005126716.1 ECF-family sigma factor C Not tested Not named Protein 2e-56 80