Gene Information

Name : cpfrc_01473 (cpfrc_01473)
Accession : YP_003783873.1
Strain : Corynebacterium pseudotuberculosis FRC41
Genome accession: NC_014329
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1608417 - 1609127 bp
Length : 711 bp
Strand : -
Note : ABC-type spermidine/putrescine transport systems, ATPase components

DNA sequence : 
ATGCCTATGCTCATAACCGCCACCGGCGTAAAAAAGACCTTTGGAAAAGGAGAACAAAAAGTTGATGTTTTAAAGGGCAT
TGACCTTGAGGTGTCTTCAGGAGAGTTTGTTGCAATCGTAGGTAAGTCTGGTTCGGGCAAATCAACGTTGCTGTATTGCT
TAAGTGGATTACTTTCCCCTGATTCAGGTTCTGTTCACCTAGCAGGCCAGTGCATTACTTCTGCATCACCACGCAAAGTT
GCTGCGATTCGCAGAGAAAGTGCGAGTTTTATCTTTCAAGACCTCAACCTGATTAGCTCACTCACGGTTGCTGACAATAT
ACGGTTGCCTGCAAAACTATCTGGGCACAACCCAAATAGACGAGCAATCAAGGAAGTACTTCACGATGTGGGGCTGACGG
GATGCGAAAATAAATACCCAAACCAGCTGTCTGGAGGCCAACAGCAGCGGGTTGCCATAGCACGGTCTCTTGTTCGCGCT
CCCCAAATACTCTTTGCTGATGAGCCTACGGGAGCTCTAGATGTGGACACGAGCTCAACGGTTCTGAAATTGCTGCACAA
AACTATTACTCAGGAGACATCTCTAGTCATGGTTACCCATGATTTAGACATAGCTGCAACGGCGGATAGGGTTGTTGTAC
TTCAGGAAGGTCTCACAGGAAAAATACTTCACCGTCCAACAGCCGCTGAAGTATTTGAAGCCTTGCACTAG

Protein sequence : 
MPMLITATGVKKTFGKGEQKVDVLKGIDLEVSSGEFVAIVGKSGSGKSTLLYCLSGLLSPDSGSVHLAGQCITSASPRKV
AAIRRESASFIFQDLNLISSLTVADNIRLPAKLSGHNPNRRAIKEVLHDVGLTGCENKYPNQLSGGQQQRVAIARSLVRA
PQILFADEPTGALDVDTSSTVLKLLHKTITQETSLVMVTHDLDIAATADRVVVLQEGLTGKILHRPTAAEVFEALH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-108 100
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-108 100
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-108 100
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-96 100

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cpfrc_01473 YP_003783873.1 hypothetical protein CP001581.1.gene798.p Protein 9e-39 44
cpfrc_01473 YP_003783873.1 hypothetical protein NC_012469.1.7686878. Protein 1e-39 42
cpfrc_01473 YP_003783873.1 hypothetical protein NC_008702.1.4606598. Protein 8e-35 42
cpfrc_01473 YP_003783873.1 hypothetical protein CP001581.1.gene598.p Protein 3e-35 41