Gene Information

Name : xerD (cpfrc_00971)
Accession : YP_003783372.1
Strain : Corynebacterium pseudotuberculosis FRC41
Genome accession: NC_014329
Putative virulence/resistance : Unknown
Product : tyrosine recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1044432 - 1045364 bp
Length : 933 bp
Strand : +
Note : Site-specific recombinase XerD

DNA sequence :
ATGACATCCCCGAAAATAGCCGCCGATCGTTGGTTAACGCATTTAGCCATAGAGCGCGGCGTCAGCGCTAATACCCTTAG
TAACTATCGACGCGATGTGCAAAGGTATCTTGATTGGATTGAGAGCCGCGGCATTGATGATTTAGGCATCTTGACCTCTC
GTGATGTTGAATCCTATGTTCTTGATCTACGGCGCGGGGATCCCGACACAGGCAAGCAGCCTTTGGCGGCCTCCTCGGCA
GGCCGTGCACTTGTGGTTGCGCGGGGACTCCATAAATTTGCAATGATGGAGGGTCTGATATCTGTTGACGTAGCTGGGGA
AGTCTCTCCGCCATCCACGGGGCGACATCTACCAGACACTCTGTCGGTTACAGAGGTAGAGGAACTTATCAGTGCGATTC
CTACGGACAATATAGCCACTCCCGAGGACTTACGCGATGCAGCTTTGATTGAACTCCTCTACGGCACGGGTGCTCGGATA
TCAGAAATTATGAATCTCACAGTGGATGAGGTGACAGTGCTGGAAGAAACAGAAGGCATGTTGCGGATTGTGGGAAAAGG
AGATAAACATCGCATTGTTCCTGTCGGCTCGATGGCGCAGAAAGCGTTACGACGCTACCTTGTACGGGCGCGGCCACAGC
TAACAAAGGGGAAAAGTCATGCGCTTTTTTTAAATAAACGCGGTGGAGCGCTATCACGGCAAAGTGCATGGCAAATTCTT
AAAAGTTCTGCGCGTAGAGCAGGCGTGCAAAAAGATATTTCGCCGCACACTTTGCGCCATAGTTATGCATCGCACCTACT
TGAAGGTGGAGCCGATGTTCGCGTTGTACAAGAACTTTTGGGACATTCATCCGTTACTACCACACAGATTTATACGCATA
TTACGGCAGATAATCTGCGAATTGTATGGTCACAGTCTCATCCGCGGGCTTAA

Protein sequence :
MTSPKIAADRWLTHLAIERGVSANTLSNYRRDVQRYLDWIESRGIDDLGILTSRDVESYVLDLRRGDPDTGKQPLAASSA
GRALVVARGLHKFAMMEGLISVDVAGEVSPPSTGRHLPDTLSVTEVEELISAIPTDNIATPEDLRDAALIELLYGTGARI
SEIMNLTVDEVTVLEETEGMLRIVGKGDKHRIVPVGSMAQKALRRYLVRARPQLTKGKSHALFLNKRGGALSRQSAWQIL
KSSARRAGVQKDISPHTLRHSYASHLLEGGADVRVVQELLGHSSVTTTQIYTHITADNLRIVWSQSHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-39 43
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-39 43