Gene Information

Name : argF1 (CLJU_c09280)
Accession : YP_003779098.1
Strain : Clostridium ljungdahlii ATCC 49587
Genome accession: NC_014328
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0078
EC number : 2.1.3.3
Position : 1034008 - 1035009 bp
Length : 1002 bp
Strand : +
Note : -

DNA sequence : 
ATGGGATTTAATTTAAGAAATAGAAGCTTTTTAACATTAATGGACTTTTCACAGAAAGAAATAAACTTTATGCTTGATCT
TGCTAGAGATTTAAAGAGAGCTAAATACCTAGGAAATGAAGAACAAAAGTTAAAGGGAAAAAATGTAGTTCTTTTATTTG
AAAAAGATTCTACAAGAACAAGATGTTCATTTCAGGTTGCTGCACAGGATCAAGGAGCTCATGTTACTTATCTTGGACCA
ACAGGAAGTCAAATGGGAAAGAAAGAGTCCGCTGCAGATACTGCAAGAGTTTTAGGAAAGATGTTTGATGGTATAGAATA
CAGAGGATATGCACAAGAAACTGTTGAAGATTTAGCAAAATATTCAGGAGTTCCAGTTTGGAATGGATTGACAGACGCAG
ATCATCCAACACAAGTTTTAGCTGACTTTTTAACAGCTAGTGAACATTTAAATAAGCCATATAATAAGATGACATTTGTT
TATTCTGGTGATGGAAGAAATAACGTTGCAAATGCACTTATGATTGGTGCTTCTAAAATGGGAATGGATTTTAGAATAGT
AACACCAAAAGAATTATTCCCAAAAGAAGAATTAGTAAATAAATGCAAAGAAGAAGCTGCAAAGAGCGGAGCTAAAATAA
CAATAACTGATGATGTTGCTAAAGGTGTAAAAGGTGCAGATGTCCTTTATACTGATGTTTGGGTATCAATGGGTGAACCT
GATGAAGTTTGGGAACAGAGAATAAAACTATTGAAACCTTATCAGATTAATATGGATATGATAAAGATGACAGGAAATGA
AAAAGTTATATTTGAACATTGCCTTCCTGCATTTCATGATTTAAAAACTAAAGTTGGAAAACAAATACATGATAAATTTG
GTTTAAATGAAATGGAAGTTACAGATGAAGTATTTGAAAGTAAATATTCTGTAGTATTTGATGAAGCAGAAAATAGAATG
CACACAATAAAAGCTGTCATGGTTGCTACTTTAGGAGATTAA

Protein sequence : 
MGFNLRNRSFLTLMDFSQKEINFMLDLARDLKRAKYLGNEEQKLKGKNVVLLFEKDSTRTRCSFQVAAQDQGAHVTYLGP
TGSQMGKKESAADTARVLGKMFDGIEYRGYAQETVEDLAKYSGVPVWNGLTDADHPTQVLADFLTASEHLNKPYNKMTFV
YSGDGRNNVANALMIGASKMGMDFRIVTPKELFPKEELVNKCKEEAAKSGAKITITDDVAKGVKGADVLYTDVWVSMGEP
DEVWEQRIKLLKPYQINMDMIKMTGNEKVIFEHCLPAFHDLKTKVGKQIHDKFGLNEMEVTDEVFESKYSVVFDEAENRM
HTIKAVMVATLGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 7e-122 74
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 6e-121 73
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 6e-121 73
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 7e-121 73
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-120 72
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-120 72
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 8e-121 72