Gene Information

Name : CLJU_c09140 (CLJU_c09140)
Accession : YP_003779084.1
Strain : Clostridium ljungdahlii ATCC 49587
Genome accession: NC_014328
Putative virulence/resistance : Virulence
Product : ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 1015104 - 1015811 bp
Length : 708 bp
Strand : +
Note : -

DNA sequence :
ATGGAAAAATACATTTTACAAACAAAAAATTTATGTAAAAATTTTAAGGGACAGCTAGCGGCAAATAATATTTCGTTTGC
AATAAAAGAAAATTCTGTTTATGGATTGCTTGGTCCTAATGGTGCCGGAAAATCTACTACATTAAAAATGATTACAGGGA
TACTTAAGAAAACTTCAGGTGAAATTATTTTTGAAGGACATCCCTGGAGCAGAAAAGATTTAAAGGATATTGGGGCACTA
ATTGAAGCTCCTCCACTATATGAGAATTTAACTGCAAGGGAAAATCTAAAGGTCAGAACTACACTACTTGGACTTAAGAA
ATCACGTATTGATGAAGTACTCCAAACGGTTGATTTAACAGACACAGGGAAAAAGCGTGCAGGTCAATTTTCCATGGGTA
TGAAGCAGAGACTTGGAATTGCTATTGCACTACTTAATCATCCTAAACTTTTAATTTTAGATGAACCTACTAACGGACTA
GATCCTATTGGTATTCAAGATTTGAGAAATCTTATTCGTTCTTTTCCAGAGCAGGGTATAACAGTTATTTTATCTAGCCA
CATATTGTCTGAGGTAGAGCTTATTGCAGATCACATTGGAATTATTAGTAATGGAATTTTAGGATATGAAGCAAAAATTA
ATCCGGGTGAGGATCTAGAATCACTCTTCATGGAAGTAGTTAAAAAATCTAAAAGGGAAATGAGGTAA

Protein sequence :
MEKYILQTKNLCKNFKGQLAANNISFAIKENSVYGLLGPNGAGKSTTLKMITGILKKTSGEIIFEGHPWSRKDLKDIGAL
IEAPPLYENLTARENLKVRTTLLGLKKSRIDEVLQTVDLTDTGKKRAGQFSMGMKQRLGIAIALLNHPKLLILDEPTNGL
DPIGIQDLRNLIRSFPEQGITVILSSHILSEVELIADHIGIISNGILGYEAKINPGEDLESLFMEVVKKSKREMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 4e-43 50
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 4e-43 50
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 4e-43 50
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 4e-43 50
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 2e-43 50
cdd4 CAA63569.1 - Not tested PaLoc Protein 1e-46 49
SPN23F_09830 YP_002510959.1 lantibiotic transport ATP-binding protein Not tested PPI-1 Protein 3e-31 47
CD241_0087 YP_005124356.1 ABC transporter ATP-binding protein Not tested Not named Protein 5e-38 44
DIP0090 NP_938487.1 ABC transporter ATP-binding protein Not tested Not named Protein 3e-38 44
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 6e-31 44
SSU98_0954 YP_001200512.1 hypothetical protein Not tested 89K Protein 2e-36 44
SSU05_0946 YP_001198312.1 hypothetical protein Not tested 89K Protein 2e-36 44