Gene Information

Name : CLJU_c07680 (CLJU_c07680)
Accession : YP_003778938.1
Strain : Clostridium ljungdahlii ATCC 49587
Genome accession: NC_014328
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 848185 - 848865 bp
Length : 681 bp
Strand : +
Note : -

DNA sequence : 
ATGGATGAAATATTAAAAGTTGAAAGCTTATCGAAGACTTATGGCAAGGGAGAAAATAAAGTTGAAGCTCTAAAGAATGT
ATCATTTACTATTAATAGAGGTGAATTTGTAGCAATAATAGGGGCATCTGGTTCTGGAAAAAGTACACTTCTACATATGC
TGGGAGGACTTGACAGGCCAACATCAGGAAAAGTGTATATAGAAAATGAAGATATATATAAGTTAAATGAAGAAAAATTA
GCTATATTTAGGAGAAGAAATATTGGGTTTGTATTTCAATTTTTTAATCTCATACCAGTTTTAAATGTAGAAGAAAACAT
ATCTCTTCCATCACTTTTGGATAGGGAGAAAGCAGATAAAGGTTACTTAGATGAAGTAATAAGTATGCTTGGATTAAAAG
AAAGGGTAACTCACCTTCCATCCGAGCTATCAGGAGGTCAGCAGCAGAGGGTATCAATTGGGAGGGCTCTTATAAATAAA
CCTGCACTTATACTTGCAGATGAACCAACTGGAAATTTAGACAGCAAAAATAGTAAAGAAGTAATAGAACTTTTAAAGTT
ATCATCAAAAAAATATAATCAAACTCTAATTATCATAACTCATGATATAAATGTAGCAGAGCAAGCAGATAGGGTTATTA
CTATATTTGATGGGGAAATAAAATCGGATAAATCAATCTAA

Protein sequence : 
MDEILKVESLSKTYGKGENKVEALKNVSFTINRGEFVAIIGASGSGKSTLLHMLGGLDRPTSGKVYIENEDIYKLNEEKL
AIFRRRNIGFVFQFFNLIPVLNVEENISLPSLLDREKADKGYLDEVISMLGLKERVTHLPSELSGGQQQRVSIGRALINK
PALILADEPTGNLDSKNSKEVIELLKLSSKKYNQTLIIITHDINVAEQADRVITIFDGEIKSDKSI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-39 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-39 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-39 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-39 43
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-26 42
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 3e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLJU_c07680 YP_003778938.1 ABC transporter ATPase CP001581.1.gene798.p Protein 6e-68 63
CLJU_c07680 YP_003778938.1 ABC transporter ATPase CP001581.1.gene598.p Protein 5e-60 57
CLJU_c07680 YP_003778938.1 ABC transporter ATPase NC_012469.1.7686878. Protein 9e-42 46
CLJU_c07680 YP_003778938.1 ABC transporter ATPase NC_008702.1.4606598. Protein 4e-35 44
CLJU_c07680 YP_003778938.1 ABC transporter ATPase NC_012469.1.7686946. Protein 1e-22 41
CLJU_c07680 YP_003778938.1 ABC transporter ATPase NC_012469.1.7685735. Protein 5e-39 41