Gene Information

Name : CLJU_c06510 (CLJU_c06510)
Accession : YP_003778829.1
Strain : Clostridium ljungdahlii ATCC 49587
Genome accession: NC_014328
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 716546 - 717235 bp
Length : 690 bp
Strand : -
Note : -

DNA sequence : 
ATGAATATATCTAAAATACTTGTTATAGAGGATGATGAAGAAATAAACAACTTAATCTATAATACTTTAAAAAATGAAAA
TTATAATATAGTACAAGCTTTTGACGGAAAAGATGCACTTGAGAAATACGACAATACTTTTCAATTGATTATTCTAGATT
TAATGCTTCCTTATATAGATGGTATAGAAGTTTTGAGAAAAATACGAGAAAATAGTACTGTACCCGTTATTATTCTTTCC
GCTAAAAATGAAGAAACCGATAGAGTTATAGGGCTCAGCATGGGTGCTGATGATTATATGATAAAACCATTTTCCACAAG
AGAACTTGCAGCTAGAGTCAAAGCTCAGCTTAGAAGATATATATACTACAATAATGTTCATGATAAAAATCCAACTTTAA
CATATAAATCTTTAAAATTAGATACTTCGAATCATAAGTTCTTTAAAGAAGACAAAGAACTAAACTTGACTCCAAAGGAA
TTTGAGCTTCTAAAGTTTTTTCTTAAAAATCCTGATAGAGTTTTTACAAAAGCACAAATATTTAATGGAGTTTGGGAAAA
TGACTATTTGCACGATGATAATACTGTAATGGTACATATTAAGAGGCTTAGGAACAAAATTGAAGATAATCCAAACAACC
CTAAATACATAGTTACTGTATGGGGAATAGGATATAAACTTGGTGAATAA

Protein sequence : 
MNISKILVIEDDEEINNLIYNTLKNENYNIVQAFDGKDALEKYDNTFQLIILDLMLPYIDGIEVLRKIRENSTVPVIILS
AKNEETDRVIGLSMGADDYMIKPFSTRELAARVKAQLRRYIYYNNVHDKNPTLTYKSLKLDTSNHKFFKEDKELNLTPKE
FELLKFFLKNPDRVFTKAQIFNGVWENDYLHDDNTVMVHIKRLRNKIEDNPNNPKYIVTVWGIGYKLGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 3e-39 43
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-38 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLJU_c06510 YP_003778829.1 transcriptional regulator NC_002952.2859905.p0 Protein 5e-46 47
CLJU_c06510 YP_003778829.1 transcriptional regulator NC_009641.5332272.p0 Protein 7e-46 47
CLJU_c06510 YP_003778829.1 transcriptional regulator NC_013450.8614421.p0 Protein 7e-46 47
CLJU_c06510 YP_003778829.1 transcriptional regulator NC_007793.3914279.p0 Protein 7e-46 47
CLJU_c06510 YP_003778829.1 transcriptional regulator NC_003923.1003749.p0 Protein 7e-46 47
CLJU_c06510 YP_003778829.1 transcriptional regulator NC_002745.1124361.p0 Protein 7e-46 47
CLJU_c06510 YP_003778829.1 transcriptional regulator NC_009782.5559369.p0 Protein 7e-46 47
CLJU_c06510 YP_003778829.1 transcriptional regulator NC_002951.3237708.p0 Protein 7e-46 47
CLJU_c06510 YP_003778829.1 transcriptional regulator NC_007622.3794472.p0 Protein 5e-46 47
CLJU_c06510 YP_003778829.1 transcriptional regulator NC_002758.1121668.p0 Protein 7e-46 47
CLJU_c06510 YP_003778829.1 transcriptional regulator DQ212986.1.gene4.p01 Protein 2e-44 44
CLJU_c06510 YP_003778829.1 transcriptional regulator AM180355.1.gene1830. Protein 5e-45 44
CLJU_c06510 YP_003778829.1 transcriptional regulator NC_012469.1.7685629. Protein 2e-42 44
CLJU_c06510 YP_003778829.1 transcriptional regulator AF155139.2.orf0.gene Protein 5e-45 43
CLJU_c06510 YP_003778829.1 transcriptional regulator NC_005054.2598277.p0 Protein 1e-46 43
CLJU_c06510 YP_003778829.1 transcriptional regulator NC_014475.1.orf0.gen Protein 1e-46 43
CLJU_c06510 YP_003778829.1 transcriptional regulator EU250284.1.orf4.gene Protein 3e-44 43
CLJU_c06510 YP_003778829.1 transcriptional regulator AF130997.1.orf0.gene Protein 1e-41 42
CLJU_c06510 YP_003778829.1 transcriptional regulator HE999704.1.gene2815. Protein 2e-42 42
CLJU_c06510 YP_003778829.1 transcriptional regulator AF162694.1.orf4.gene Protein 8e-43 42
CLJU_c06510 YP_003778829.1 transcriptional regulator CP001581.1.gene280.p Protein 3e-43 41
CLJU_c06510 YP_003778829.1 transcriptional regulator AF253562.2.orf0.gene Protein 3e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLJU_c06510 YP_003778829.1 transcriptional regulator VFG1563 Protein 2e-39 43
CLJU_c06510 YP_003778829.1 transcriptional regulator VFG1702 Protein 7e-39 43