Gene Information

Name : CLJU_c05390 (CLJU_c05390)
Accession : YP_003778723.1
Strain : Clostridium ljungdahlii ATCC 49587
Genome accession: NC_014328
Putative virulence/resistance : Unknown
Product : IS66 like transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 584594 - 584950 bp
Length : 357 bp
Strand : -
Note : -

DNA sequence :
ATGTTGGGTGATATTTCAAAAGCAGAGAAGGTATATATTGCAACTGGATATACAGATATGAGAAAATCCATTGATGGACT
TGCTGCAATTGTACAGCAGAATTTTGAGCTGAATCCATTCCAAAATAGCTTATTTTTGTTCTGTGGTCGGAAAAGAGACA
GAATGAAGGCATTATATTGGGAGGGTGATGGCTTTGTACTTCTTTATAAAAGATTAGAAAATGGACGTTTTCAGTGGCCC
CAGGATGCACAGGCAGTAAAATGCATAACTCCCCGGGAATTTCGGTGGCTCCTGGAAGGACTGTCATTGAATCAGCCGAA
GGCTGTAAAAAAGGTAGATGTACAAAATGCCCTCTAG

Protein sequence :
MLGDISKAEKVYIATGYTDMRKSIDGLAAIVQQNFELNPFQNSLFLFCGRKRDRMKALYWEGDGFVLLYKRLENGRFQWP
QDAQAVKCITPREFRWLLEGLSLNQPKAVKKVDVQNAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAF71493.1 unknown Not tested Hrp PAI Protein 1e-16 44
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 5e-16 42
ECUMN_3327 YP_002414007.1 putative transposase ORF2, IS66 family Not tested Not named Protein 1e-13 41
unnamed AAL08461.1 unknown Not tested SRL Protein 5e-13 41
c3561 NP_755436.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-13 41
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 2e-12 41
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 2e-12 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLJU_c05390 YP_003778723.1 IS66 like transposase VFG1698 Protein 4e-14 41
CLJU_c05390 YP_003778723.1 IS66 like transposase VFG1052 Protein 2e-13 41