Gene Information

Name : CLJU_c05160 (CLJU_c05160)
Accession : YP_003778700.1
Strain : Clostridium ljungdahlii ATCC 49587
Genome accession: NC_014328
Putative virulence/resistance : Virulence
Product : exopolysaccharide biosynthesis protein
Function : -
COG functional category : D : Cell cycle control, cell division, chromosome partitioning
COG ID : COG0489
EC number : -
Position : 560797 - 561516 bp
Length : 720 bp
Strand : +
Note : -

DNA sequence : 
ATGGAAAAACCAGATATAATTACTGTAAAAAATCCTAAAGATCCTATTGCTGAAGCTTATAGGACACTTAGAACCAATAT
TCAGTTTTCTTCTTTTGACAAGAAGATACAGACTATAATGCTCACAAGTTCCGGTCCTGGAGAAGGAAAGTCAACTACCT
GCTCAAATTTGGCAGTGGTTATGGCAGAGTCCGGATCAAAGACAATCCTAATAGATTGTGATCAGAGAAAGCCAAGGCTT
CATAAGATATTTTTGACTACAAATGAAGTTGGATTATCGGATGTTTTGGTTGGTAAAGTTAAATTTGAAGAGGCTGTAAA
AGAAACAGGTATAGAAAATCTTAATTTGTTAACCTCCGGTACTAGACCGCCAAATCCATCAGAGCTTTTGGCATCAAAGA
AGATGGAAAATTTTTTGCAGGACTTAAAGGAGAAATATGAATACATAATAATAGATACGCCTCCTGTAGTTGCAGTAACA
GATGCCCAGCTTTTGTCCCGTTATGCAGATGGATGTCTGCTTGTAATAGCATCTTCCCAGGTAGAAAAGGAAGCAGCAGT
AAAGGCTAAGGAACTACTTGTAAAGGTAAATGCCAATATAGTAGGAGTAGTTTTAAATAAGTTGGAGATAAAGGAAAAGG
GTTACTATGGCTATTACTACCATTATTATTATGGCAGTGATGGAACTAAAATTAAAAAGAAAGAAAAAAGAAAAAAGTAA

Protein sequence : 
MEKPDIITVKNPKDPIAEAYRTLRTNIQFSSFDKKIQTIMLTSSGPGEGKSTTCSNLAVVMAESGSKTILIDCDQRKPRL
HKIFLTTNEVGLSDVLVGKVKFEEAVKETGIENLNLLTSGTRPPNPSELLASKKMENFLQDLKEKYEYIIIDTPPVVAVT
DAQLLSRYADGCLLVIASSQVEKEAAVKAKELLVKVNANIVGVVLNKLEIKEKGYYGYYYHYYYGSDGTKIKKKEKRKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0061 YP_300151.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 1e-40 47
cap1B AAA64641.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 9e-41 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLJU_c05160 YP_003778700.1 exopolysaccharide biosynthesis protein VFG1298 Protein 3e-37 47
CLJU_c05160 YP_003778700.1 exopolysaccharide biosynthesis protein VFG1368 Protein 5e-26 41