Gene Information

Name : ssb3 (CLJU_c42780)
Accession : YP_003782381.1
Strain : Clostridium ljungdahlii ATCC 49587
Genome accession: NC_014328
Putative virulence/resistance : Unknown
Product : ssDNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 4615306 - 4615746 bp
Length : 441 bp
Strand : -
Note : -

DNA sequence :
TTGAATAAGGTTGTTTTAATTGGAAGATTAACCAAAGATCCAGAATTGAGATTTACACCAGGAAATGGTACAGCAGTTAC
CACTTTTACTATAGCCGTTGATAGGAGATTTTCTAAAGATGGGCAAAAAGAGGCAGATTTTATCCCTATAGTTGTATGGG
GAAAACAAGCTGAATCTACTGCAAATTATATGAGTAAAGGAAAACTTATAGGTATTAGTGGTAGAATCCAGACTAGAAAT
TATGAAGCTAAAGACGGTACTAGAAGATATGTTACTGAGGTTATTGCAGAAGAAGTTCAATTCCTAGAATGGGGAGAGAA
ATCTGCAAAGAACTCATATAATCAAACTTCATCTGAAAATTTTGGAAAAACTCAAAACTTTGATGAGAATATTTATGGAG
AGGATATTACTCCAGTAGATGATGGAGATATACCTTTTTAA

Protein sequence :
MNKVVLIGRLTKDPELRFTPGNGTAVTTFTIAVDRRFSKDGQKEADFIPIVVWGKQAESTANYMSKGKLIGISGRIQTRN
YEAKDGTRRYVTEVIAEEVQFLEWGEKSAKNSYNQTSSENFGKTQNFDENIYGEDITPVDDGDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 6e-28 64
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 6e-28 62
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 8e-28 62
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 8e-26 61
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 2e-26 57
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 3e-24 53
EFAU085_00699 YP_008394223.1 single-strand binding protein Not tested Not named Protein 4e-22 50
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 1e-27 45
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 2e-27 45
ef0030 AAM75236.1 EF0030 Not tested Not named Protein 3e-20 45
ssb-3 NP_814291.1 single-strand binding protein Not tested Not named Protein 4e-20 45
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 2e-28 43
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 5e-28 43
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 3e-28 43
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 3e-28 43
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-28 43
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 2e-28 43