|
Name : lysS (CLJU_c41480) Accession : YP_003782265.1 Strain : Clostridium ljungdahlii ATCC 49587 Genome accession: NC_014328 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 4490389 - 4491900 bp Length : 1512 bp Strand : - Note : - DNA sequence : ATGTCAAAAGACGAAAAGAAATTACATGCACTAGAAGAAAAGTCTAATGAGCTCATTAGGGAGAGACTGCAAAAATTTGA AGACCTTAAAGAAGCAGGAAAAGATCCTTTTGACGTATATAAAGTAGAAAGGACACATACTTCAAAAGAAGTAAAGGACA ACTATGATACTTTAGAAGGTAAAGATGTAACTGTAGCAGGAAGGCTTATTTCGAAAAGAGTTCATGGAAAAGCTGGATTT TCCGATTTGTATGATAGATATGGAAAGATACAGTTATATATAAGGATAAACGATGTAGGTGAAGAGAAATTAAAAGAGTA CAAATCCTATGATATTGGTGATATTTTATCTGTAACTGGTAGGGTATTTAAAACTAAAACAGAAGAAATATCAATTCATA TTACAGATTTTGAACTGGTAGCTAAGTCTCTCAAACCGCTTCCAGAAAAATGGCATGGCTTAAAAGATCCAGATTTGAGA TATAGGCAGAGATATGTGGATTTAATAATAAACAGTGACGTTAGAGATACTTTCTTGAAGAGAACTGCCATAATAAAGTC AATAAGAGAATTCCTAGATAATAAGGACTACATAGAAGTGGAGACTCCAATACTTTCGTCAATAGCTGGAGGAGCTGCAG CAAAACCTTTTACAACCCATCATAATGCACTTGATATAGATATGTATTTGAGAATTGCTACAGAACTATATCTTAAAAGA CTTATAGTTGGTGGTTTTGAAAAAGTATATGAAATAGGTAAATGCTTTAGAAATGAAGGTATGGATATAAGGCACAATCC AGAATACACATCTATTGAATTATATGAAGCTTTTGCAGATTATAACGATATGATGGAAATTACTGAAAATATGATAGCCT ATGTATGTGAGAAAGTCCTTGGTACTACAAAGGTAGTTTATGAAGATACGGAAATAGACTTTAAGCCACCATGGAATAGA ATTACTATGGTAGAAGCAGTTAAAAAATTTGCAAATGTAGATTTTGATGAAGTGAAAGACGATGAAGAAGCTAGAGAAAT TGCTAAAGGAAAACATATTGAATTAAAGAAGGAACTGAAGGATTGTTCAAAGGGTGATATATTGGATGCTATGTTTGAAG AATTTTGCGAAGAAAAGTTTATTCAACCTACTTTTGTAATGGATTATCCTGTAGAAATATCACCTCTTACTAAAAAGAAA AGAGGAAATCCTAAGTTTACGGAAAGATTCGAAGGATTTATATTTGGAAGAGAAATATGTAATGCATATTCAGAACTAAA TGATCCTATAGTGCAGAGAGAAAGATTTATGCAGCAGCTAAAAGAAAGAGAACTAGGTGATGATGAGGCATATATGATGG ATGAAGATTTCTTAAATGCACTTGAGATAGGCATGCCTCCAACTGGAGGTTTGGGAATAGGAGTAGATAGACTTGTAATG TTCCTTACGAATGCCACTTCAATAAGGGATGTTATATTATTTCCTACAATGAAGCCAAATCAACAGCAGTAA Protein sequence : MSKDEKKLHALEEKSNELIRERLQKFEDLKEAGKDPFDVYKVERTHTSKEVKDNYDTLEGKDVTVAGRLISKRVHGKAGF SDLYDRYGKIQLYIRINDVGEEKLKEYKSYDIGDILSVTGRVFKTKTEEISIHITDFELVAKSLKPLPEKWHGLKDPDLR YRQRYVDLIINSDVRDTFLKRTAIIKSIREFLDNKDYIEVETPILSSIAGGAAAKPFTTHHNALDIDMYLRIATELYLKR LIVGGFEKVYEIGKCFRNEGMDIRHNPEYTSIELYEAFADYNDMMEITENMIAYVCEKVLGTTKVVYEDTEIDFKPPWNR ITMVEAVKKFANVDFDEVKDDEEAREIAKGKHIELKKELKDCSKGDILDAMFEEFCEEKFIQPTFVMDYPVEISPLTKKK RGNPKFTERFEGFIFGREICNAYSELNDPIVQRERFMQQLKERELGDDEAYMMDEDFLNALEIGMPPTGGLGIGVDRLVM FLTNATSIRDVILFPTMKPNQQQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 3e-104 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_003782265.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-104 | 47 |
