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Name : kdpB (CLJU_c39550) Accession : YP_003782081.1 Strain : Clostridium ljungdahlii ATCC 49587 Genome accession: NC_014328 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit b Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.12 Position : 4301751 - 4303814 bp Length : 2064 bp Strand : - Note : - DNA sequence : ATGAAAAATAAAATTAAAAAATCTAAGTTTATTACAAAGAGCATAATGAAAGATGCAATTGTAGAAGCTCTAAAAAAATT AAATCCTAAATATATGATTAAAAATCCTGTTATGTTTGTAGTTGAAATTGGATTCTTTATATCTTTGCTTAGCACAATTT TCCCTAATATATTTGGGGACAAAGGAAGTAATTTAAGAAGTTATGATTTTATAGTAGCTCTAATTTTATTTATAACAATA TTGTTTGCAAACTTTGCAGAAGCAATAGCTGAAGGAAGAGGAAAAGCTCAAGCAGAAACGCTTAAGAAAACCCGTAAGGA TACTTCTGCAAAATTACTTGATTTAAATGGCAATATAACTGTTATAAATGCAAGTGAATTAAAAAAAGGTGACATAGTTT TAGTGGAAAATGGAGATATAATTCCAAATGATGGAGAAGTTGTTTGCGGTATAGCATCTGTAGATGAATCTGCAATAACT GGTGAATCAGCACCTGTTGTAAAAGAATCAGGAGGGGATTTTGCTTCAGTTACAGGAGGAACTAAAGTTGTAAGTGATTG GTTGAAAGTAAAAATAACAGCAACTCCAGGAGAATCTTTTTTAGATAAAATGATAAGTCTGGTAGAAGGGGCTTCAAGGC AGAAAACACCTAATGAAATTGCTCTTAATACTGTGCTTGTAAGTTTAACACTTATTTTTCTTATAGTACTTGCAGCACTT TATCCTATGGCTTCTTATACAGGGGTAAAGCTTTCAATATCTACTCTTATAGCTCTTTTAGTTTGCCTTATACCAACAAC AATAGGAGGACTTTTATCTGCAATAGGTATAGCTGGAATGGATAGAGTTACAAGATTTAATGTTATAGCTATGTCTGGAA AAGCAGTAGAATCCTGTGGAGATGTGGATACCATGATACTTGACAAGACTGGTACCATAACTTTTGGAAACAGGCTAGCT TCAGATTTTATTCCTGTAGAACATGTATCTAAAGAAGAGCTTATAGATTATGCTGTTTTATGTTCTTTAAAGGATGATAC GCCAGAGGGCAAATCCACAGTAGAACTTGGATATAAATTGGGTTCAAAAGTGGAAAAATCCAAATATGAGGACATGGAAT TTGAAGAATTTACAGCACAGACTAGAATGAGTGGGGTTAATTTAAAGGATGGTACTTCTATAAGAAAAGGGGCCTATGAT GCTATAAAAGATAGAGTGGGGAAATTAAAAGGAGCTATTCCATATGGACTAGATGATATTGTAAACAAAGTAGCAAGCTT GGGAGGAACACCACTTGTAGTATGTGTGGATAATAAAATTTATGGAGTTATATATCTTAAAGATACCGTAAAGCCAGGTC TTGTGGAAAGATTTCAAAGGCTTCGTGAAATTGGAATCAAAACTATAATGTGTACCGGAGACAACCCACTTACGGCAGCA ACTATTGCTAAAGAGGCAGGAGTGGATAGTTTTATTGCTGAATGCAAGCCAGAGGATAAAATAGAAGCTATAAAAAAAGA ACAATCAGAAGGTAAAATTGTAGCAATGACAGGAGATGGAACAAATGATGCTCCGGCACTAGCGCAGGCAGATGTGGGAC TTGCTATGAATAGTGGTACCACTTCAGCTAAAGAGGCTGCCAACATGGTGGACTTAGATTCAGATCCAACCAAGATACTA GAAGTAGTTGAAATAGGAAAGCAGCTTTTAATAACAAGAGGAGCACTTACTACTTTTAGCATAGCTAATGATGTAGCTAA ATATTTTGCTGTAATACCTGCTATGTTTGCAGTAGCTATACCTAGAATGCAGGTGATGAATGTTATGAAATTGGCAACAC CTTATAGTGCTATACTATCTGCGTTAATATTCAATGCCATAATAATACCTCTTTTAATACCTATTGCTATGAGAGGCGTA AAATATAGACCTATGAGATCAGAGACAATGCTTTTGAGGAATATGCTTGTTTTTGGATTTGGAGGAATTATTACTCCATT TATAGGAATAAAAATTATAGATTTACTAATAACTCCATTAGTTAGAATTCTTAATTTAGGTTAG Protein sequence : MKNKIKKSKFITKSIMKDAIVEALKKLNPKYMIKNPVMFVVEIGFFISLLSTIFPNIFGDKGSNLRSYDFIVALILFITI LFANFAEAIAEGRGKAQAETLKKTRKDTSAKLLDLNGNITVINASELKKGDIVLVENGDIIPNDGEVVCGIASVDESAIT GESAPVVKESGGDFASVTGGTKVVSDWLKVKITATPGESFLDKMISLVEGASRQKTPNEIALNTVLVSLTLIFLIVLAAL YPMASYTGVKLSISTLIALLVCLIPTTIGGLLSAIGIAGMDRVTRFNVIAMSGKAVESCGDVDTMILDKTGTITFGNRLA SDFIPVEHVSKEELIDYAVLCSLKDDTPEGKSTVELGYKLGSKVEKSKYEDMEFEEFTAQTRMSGVNLKDGTSIRKGAYD AIKDRVGKLKGAIPYGLDDIVNKVASLGGTPLVVCVDNKIYGVIYLKDTVKPGLVERFQRLREIGIKTIMCTGDNPLTAA TIAKEAGVDSFIAECKPEDKIEAIKKEQSEGKIVAMTGDGTNDAPALAQADVGLAMNSGTTSAKEAANMVDLDSDPTKIL EVVEIGKQLLITRGALTTFSIANDVAKYFAVIPAMFAVAIPRMQVMNVMKLATPYSAILSALIFNAIIIPLLIPIAMRGV KYRPMRSETMLLRNMLVFGFGGIITPFIGIKIIDLLITPLVRILNLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 3e-167 | 63 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 4e-167 | 63 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 4e-167 | 63 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 4e-167 | 63 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 4e-167 | 63 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 5e-168 | 63 |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 9e-141 | 54 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 7e-141 | 54 |
