|
Name : CLJU_c39510 (CLJU_c39510) Accession : YP_003782077.1 Strain : Clostridium ljungdahlii ATCC 49587 Genome accession: NC_014328 Putative virulence/resistance : Unknown Product : two-component response regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 4297237 - 4297935 bp Length : 699 bp Strand : - Note : - DNA sequence : ATGGATAGTAAGCCTTATATTCTTGTAATTGAAGACGACAGACCAATAAGAAATTTTATTACAGCAGCTTTATCTTCCCA GGGATATAAATATATTGAAACAGATAAGGGAAATGAAGGCATTTCTCTTGTAATGTCACACAATCCTGATCTTATAATAT TAGATTTGGGTCTTCCAGATATTGATGGAATTGAAGTTATAGAAAAAGTAAGAGGATGGTCCAATATTCCCATTATAGTT GTATCTGCAAGAGGAAATGAAAGACAGAAAGTTGAAGCACTTGATAAGGGCGCAGATGACTATTTAACTAAACCTTTTAG TATAAGTGAATTGCTTGCTAGAATTCGTGTGTCTTTAAGGCATCTTATTGTAAACAAAGATCAACATGAAATATTGAATA ATTTTAAGGTAAAAAGGCTATCTATAGATTTCGATAAAAGACGTGTAACTGTAGAAGGTAAAGAGATACATTTAACTCCT ATAGAATATAAAATAATGGCACTTTTATGTAAGTATTCAGGAAAAGTGCTGACTCATAATTTTATTATTCGTGAAATATG GGGTTCATCCTTGGGAAGTGAAACTAAATCATTAAGGGTGTTTATGGCAAATTTAAGACGAAAGATAGAAAAAGATCCTG CACAGCCTGAGTATATATACACAGAAGTTGGAGTAGGCTACAGGCTTGCAGATGAGTAG Protein sequence : MDSKPYILVIEDDRPIRNFITAALSSQGYKYIETDKGNEGISLVMSHNPDLIILDLGLPDIDGIEVIEKVRGWSNIPIIV VSARGNERQKVEALDKGADDYLTKPFSISELLARIRVSLRHLIVNKDQHEILNNFKVKRLSIDFDKRRVTVEGKEIHLTP IEYKIMALLCKYSGKVLTHNFIIREIWGSSLGSETKSLRVFMANLRRKIEKDPAQPEYIYTEVGVGYRLADE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0571 | NP_814337.1 | DNA-binding response regulator | Not tested | Not named | Protein | 1e-36 | 46 |
| ef0091 | AAM75294.1 | EF0091 | Not tested | Not named | Protein | 9e-37 | 46 |
| kdpE | BAA82188.1 | KDP operon transcriptional regulatory protein KdpE | Not tested | Type-II SCCmec | Protein | 3e-31 | 42 |
| SH0031 | YP_251946.1 | hypothetical protein | Not tested | SCCmec | Protein | 5e-30 | 42 |
| kdpE | YP_039536.1 | response regulator protein | Not tested | Type-II SCCmec | Protein | 4e-31 | 42 |
| kdpE | NP_370594.1 | transcriptional regulator kdpE | Not tested | Type-II SCCmec | Protein | 4e-31 | 42 |
| kdpE | NP_373306.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 4e-31 | 42 |
| kdeP | YP_190033.1 | DNA-binding response regulator KdeP | Not tested | Type-II SCCmec | Protein | 4e-31 | 42 |
