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Name : CLJU_c03770 (CLJU_c03770) Accession : YP_003778561.1 Strain : Clostridium ljungdahlii ATCC 49587 Genome accession: NC_014328 Putative virulence/resistance : Unknown Product : recombinase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1961 EC number : - Position : 388559 - 390160 bp Length : 1602 bp Strand : + Note : - DNA sequence : ATGCCAAAGGTTTCGGTGATACCTGCAAAACAGGTACAGGTGATAAATGGTATTAAAGATAAAAAGAAGAAAAGAGTATG TGCTTACTGTAGAGTAAGTACGGATACTGATGAGCAGCTCACAAGTTATGAAGCTCAGGTAACTTACTATGAAAGCTATA TTAGAGGCAAGCCGGAATATGAGTTTGCAGGAATTTTTGCTGATGAAGGTATAACTGGTACAAATACAAAACATAGGACA GAATTTAAAAGAATGATTGATGAGGCACTTGCAGGTAAGTTTGATATGATCATTACAAAATCAATTTCAAGGTTTGCACG TAATACACTAGATTGTCTTAAATATGTAAGGCTTTTAAGGGATAAAGGAATAGGGGTGTATTTTGAAAAAGAAAATATTG ATACACTGGATTCAAAAGGAGAAGTTTTGCTTACCATTTTATCTTCCCTTGCACAGGACGAATCAAGGAACATTTCGGAA AACAGCAGATGGGGTATAGTTAGAAGATTTCAGCAGGGAAAAGTAAGAGTTAACCATAAAAGATTTTTAGGATATGATAA AGATGAAAATGGCGAGCTTATTATAGATGAGGAACAGGCTAAAATAGTCAGGCGTATATATAAAGAATATCTTGAGGGAA AAGGTATAAGAGCTATAGGAAAAGACCTTGAAAGAGATAATATTCTGACAGGTGCAGGAGGAAGAAAGTGGCATGATTCA ACGATTCAGAAGATATTAAGAAATGAGAAGTATTCTGGAGATGCACTGCTTCAGAAAACTATAACTACAGATTTTCTAAC TCATAAAAGGGTGAAGAATAAAGGTGAAGTCCAGCAGTATTACGTTGAAGACAGCCATCCGGCAATAATATCAAAAGAAA TGTTTCGAATGGTTCAGGAAGAAATAAAAAGAAGGGCATCACTTATAGGATATTCAGAAAAAACTAAAAGTAGATATACC AATAAATATGCCTTTTCGGGAAGGATAGTATGCGGTAATTGCGGCAGTAAATTCAGGAGAAAGAGATGGGGACCAGGTGA AAAATATAAAAAATATGTGTGGCTTTGTGCCAATCATATTGATAATGGTTTAAAAGCTTGCAGCATGAAAGCTGTATCTG AAGAAAAACTAAAAGCTGCATTTGTAAGATCTATAAATAAAATCATTGAAAATAAGGAAGCTTTTATTAAAACTATGATG GAAAATATAAGTAGGGTATCAGAAAGTAAAGAAGATAGAAGTGAACTTAAAATAATAAATGAAAGTCTGGAAGAATTGAA GGAGCAGATGATGAATCTGGTAAGACTAAATGTAAGAAGCAGCTTGGATAACCAGATTTATGATGAGGAATATGAGAGGC TTGAAGAAGAAATAAAACAGTTGAAAGAAAAGAAGGCAGGGTTTGATAATACAGAGTTGATAAAGAAAGAGGGTATTCAG GAAGTAAAAGAAATTGAAAGAATTTTAAGAGACAGACAAGATATTATTAAGGATTTTGATAGAGAGCTTTTCATGCAGAT TGTTGATAAGGTGAAAGTAATAAGTTTGGTGGAGGTTGAATTTATCTATAAAAGTGGTGTTGTTGTAAAAGAAATATTGT AA Protein sequence : MPKVSVIPAKQVQVINGIKDKKKKRVCAYCRVSTDTDEQLTSYEAQVTYYESYIRGKPEYEFAGIFADEGITGTNTKHRT EFKRMIDEALAGKFDMIITKSISRFARNTLDCLKYVRLLRDKGIGVYFEKENIDTLDSKGEVLLTILSSLAQDESRNISE NSRWGIVRRFQQGKVRVNHKRFLGYDKDENGELIIDEEQAKIVRRIYKEYLEGKGIRAIGKDLERDNILTGAGGRKWHDS TIQKILRNEKYSGDALLQKTITTDFLTHKRVKNKGEVQQYYVEDSHPAIISKEMFRMVQEEIKRRASLIGYSEKTKSRYT NKYAFSGRIVCGNCGSKFRRKRWGPGEKYKKYVWLCANHIDNGLKACSMKAVSEEKLKAAFVRSINKIIENKEAFIKTMM ENISRVSESKEDRSELKIINESLEELKEQMMNLVRLNVRSSLDNQIYDEEYERLEEEIKQLKEKKAGFDNTELIKKEGIQ EVKEIERILRDRQDIIKDFDRELFMQIVDKVKVISLVEVEFIYKSGVVVKEIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smi_1713 | YP_003446815.1 | site-specific recombinase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-113 | 56 |
| SSU05_0953 | YP_001198319.1 | DNA recombinase | Not tested | 89K | Protein | 3e-112 | 54 |
| SSU98_0960 | YP_001200518.1 | DNA recombinase | Not tested | 89K | Protein | 3e-112 | 54 |
