Gene Information

Name : CLJU_c36550 (CLJU_c36550)
Accession : YP_003781798.1
Strain : Clostridium ljungdahlii ATCC 49587
Genome accession: NC_014328
Putative virulence/resistance : Unknown
Product : phage related DNA polymerase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0749
EC number : 2.7.7.7
Position : 3981611 - 3983563 bp
Length : 1953 bp
Strand : -
Note : -

DNA sequence :
ATGGATACTTTAGCAATAGATGTTGAAACATATTGCGAGTTAGATATTAAAAAAGTGGGTGCTTATAAATATTGTGAGCA
CCCATCATTTCAAATACTACTATTTGCTTATGCTTTCAATGATGAACCAGTAGAAGTTATAGATTTTGCTCAGGGTGAAG
AATTACCCCAGAAAGTTAAAACTGCTCTATTAAATCCAGGAATATTAAAAACTGCATTTAATGCCAATTTTGAGATTAAT
GCATTAAAGAAATATTTAATAAATGGAATAGATGCTGAAGATTGGCAATGCACAATGGTTCAATCTCTAATACTTGGTTT
ACCAGGTTCACTTGATATGGTTGGTAAAGTACTGCGTTTTGAAGAAGACAAGCAAAAAATGAAAGAAGGTAAAGCCTTAA
TTCAATATTTCTGTAAGCCATGCAAGCCAACTAAATCCAATGGTGGCCGAACTAGAAATTTACCTGAACATGCACCAGAA
AAGTGGGAGATATTTAAAAAATATAATAAGCAAGATGTTGAGGTTGAAAGAGCTATAAGAAATAAATTGAATAGGTATCC
AACTACAGAAAATGAACAGAGATTATGGGAATTAGACCAGTGCATAAATGATAGAGGTGTTGGAGCTGATATAGAGCTTA
TAGAAAAAGCAATTGAATGTAATAACAGTTATAATAAAAGGCTTACGAAAGAGGCTACAGAATTAACAGGATTAAGCAAT
CCTAATAGCCCAACTCAATTAAAAAGATGGATTGGTGAAAGGGTTGGCCATGAAGTTAAAAGTCTTACAAAGGACAGTAT
ACCAACACTTATAAAAGAAAGTAAAGATGAAAAAGTTAAAAAAATTTTAGAATTAAGACAGCTTATGGCCAAGACAAGTA
TAAAAAAATATGAAACTATGCAAAGAGCTAGATGTGAAGACGGAAGAATGAGAGGGTTATTACAATTCTATGGTGCAAAC
CGTACTGGAAGATGGGCTGGAAGATTAGTACAAGTACAGAATTTGCCACAAAATCATTTACCAGATTTAGATGATGCCAG
AAACTTCATAAGAACAGGACAATTTGATAAAGTTGAGTTCTTATATGACAGTATACCTGACACGCTTTCACAGCTTATTA
GAACTGCATTTATACCTAAGGAAGGTAATAGGTTTATTGTTGCTGACTTTAGCGCCATAGAGGCAAGAGTAATTGCCTGG
TATGCAGGAGAACAATGGAGGCTTGATGTTTTTAATAATAATGGTGATATTTATTGTGCCTCTGCATCTAAAATGTTTAA
GGTTCCTGTAGAAAAGCATGGTATTAATGGACACCTGAGGCAAAAAGGAAAGATAGCAGAATTAGCACTAGGTTATGGTG
GAAGTGTTGGAGCTCTTATGAGTATGGATAAGAAAAAAAATATTCCAGAAGATGAACTCCCAGGACTGGTAAAAGATTGG
AGAGATGCAAGCCCACACATAACTAAATTTTGGTGGGACGTAGACAAAGCAGCTAAAAAAGCAATAAGAGAGAGGACAAC
AGTAGTTCTGCAATTTGGACTTAAATTTATATATGACCCAGGGGTTTTATTTATTCAACTGCCAAGTGGAAGAAAGTTAG
CTTATATAAGACCTAAGATAGAGCCCGGTCCATATGATAAACCAATAATTACTTATGAAGGCTTACAGCAGACTTCTAAA
CAGTGGACTACATTAGAAACTTATGGACCTAAGATTGTAGAGAATATAGTTCAAGCCACTGCTAGGGATTGCCTAGGCAT
AACAATGCAGAGAGTTGAAGACAAAGGTTTTCATATTGTGATGCATGTTCATGATGAACTTATATGCGATGTACCTAAGG
GTAAAGGAACAGTGGAAGAAATATGTGATATTTTTGGTGAACCTATAGAATGGGCTCCAGGACTTCCACTTAAAGCGGAT
GGGTATGAATGTAATTACTATATGAAAGATTAA

Protein sequence :
MDTLAIDVETYCELDIKKVGAYKYCEHPSFQILLFAYAFNDEPVEVIDFAQGEELPQKVKTALLNPGILKTAFNANFEIN
ALKKYLINGIDAEDWQCTMVQSLILGLPGSLDMVGKVLRFEEDKQKMKEGKALIQYFCKPCKPTKSNGGRTRNLPEHAPE
KWEIFKKYNKQDVEVERAIRNKLNRYPTTENEQRLWELDQCINDRGVGADIELIEKAIECNNSYNKRLTKEATELTGLSN
PNSPTQLKRWIGERVGHEVKSLTKDSIPTLIKESKDEKVKKILELRQLMAKTSIKKYETMQRARCEDGRMRGLLQFYGAN
RTGRWAGRLVQVQNLPQNHLPDLDDARNFIRTGQFDKVEFLYDSIPDTLSQLIRTAFIPKEGNRFIVADFSAIEARVIAW
YAGEQWRLDVFNNNGDIYCASASKMFKVPVEKHGINGHLRQKGKIAELALGYGGSVGALMSMDKKKNIPEDELPGLVKDW
RDASPHITKFWWDVDKAAKKAIRERTTVVLQFGLKFIYDPGVLFIQLPSGRKLAYIRPKIEPGPYDKPIITYEGLQQTSK
QWTTLETYGPKIVENIVQATARDCLGITMQRVEDKGFHIVMHVHDELICDVPKGKGTVEEICDIFGEPIEWAPGLPLKAD
GYECNYYMKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_2073 YP_002747288.1 phage DNA polymerase Not tested ¥ÕSeq4 Protein 4e-150 52
MW1425 NP_646242.1 DNA polymerase Not tested ¥ÕSa2 Protein 2e-148 49
polA YP_494120.1 phage related DNA polymerase family A Not tested ¥ÕSa2 Protein 2e-148 49