Gene Information

Name : CLJU_c36530 (CLJU_c36530)
Accession : YP_003781796.1
Strain : Clostridium ljungdahlii ATCC 49587
Genome accession: NC_014328
Putative virulence/resistance : Virulence
Product : phage-like protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG5545
EC number : -
Position : 3977221 - 3979644 bp
Length : 2424 bp
Strand : -
Note : -

DNA sequence :
TTGGAATATACGGCAAGAAATAGTCCCAAAATTAAAATTAAATATGATGGATCCATAACACTTGCCACCGGAAAAAGCAA
ACATGAAAAACATTGGAAAAACAAAAATTTATTATACTCGGCTCTAGTTGAAAAGCTATCTAATACAACAAGAACACCTG
AAACTTATACAGAATATAAAAAAATGTCTAAGAGTGAAAGAGACAGAATTAAAGATATTGGCGGATTTGTAGGTGGCTCT
TTAAAAAATGGTCGTAGGAAGGCTGAGAACGTTGCTAATAGGACGCTAATTACTTTAGATATAGATTATGCAAATGGCGA
TATATGGTCAAGTATAGAGCTTTTATGGGACTTTAATTGTCTTATGTATTCAACTCATACACATGCGCCAGATAATCAAA
GACTGAGACTTGTAATACCTTTATCAAGGCCAGTGCTTCCAGATGAATACCAGGCTATTGCTAGAATAATTGCAGATGAT
TTAGGGATAGACCAGTTTGACGATACAACATATGAACCCTCAAGACTTATGTATTGGCCAAGTACTTCAAGTAATGGAGA
ATACGTGTTTAAGGTTCAAGACTTACCATGGCTTAATCCTGATGAAGTGCTTGATAGATATACGTTTGGATGGCAGGATG
TAAGTTACTGGCCAGAGAGCAGCAGAACAAGAGCAAAGATAAACACAGCTATAAAGAAACAGGAAGACCCATTAAATAAA
AAAGGTGTTATAGGTGCTTTCTGCAGGACCTATTCAATAAGCGAAGCTATAGATGAGTTTTTAAAAGATGTGTATGTACC
TGGCATGGATGAAACCAGGTACACATATGCGGAAGGTTCAACAGCAGGTGGGGTTGTAGTGTATGAAGATAAATTCAGTT
ACAGCCATCATGGTACGGACCCAGCTTCAGAAATATTATGTAATGCTTTTGACTTAGTAAGAATACACAAGTTTGGTGGG
CTTGATGATGAAGCAAAACCAGATACACCAGCTAATAGATTACCCTCATTTACTAAAATGACTGAATTTGCATCCAATGA
TGAAAAGGTAATACAAACTCTTGGTAAAGAACGTATGGAAAAAGCTCAGGAGGACTTTGGAATAGTTGAGGATGAAACAG
ACACCAGGTGGCTTAAAGATCTTGAATATACAGACAATGGAAAGTTAAGGAGTACCATAAGCAACTTTCTTTTAGTAATT
GAAAATGAGCCTCTATTAAAAGGAAAAATTGCTTATAATGAATTTTCAAATAGAGCTGTAGTTATTGGGCAACTGCCCTG
GAGAAAAAAAGATAATATGTCAGACTGGAATGATACTGACGATAGTGGGCTTAGAGAATTTATAGAAAAGTATTACAAAA
TAAATTCTACAACAAAATGTGCTGATGCTCTAGCCTTAAGTTTTGAAAAACATTCATTCCATCCAATAAAAGAGTATTTA
GATAGTTTATTATGGGATGGCATTAAAAGAGTTGATACTTTACTTATAGATTACTTAGGTGCTGAAGACAACAGTTATGT
AAGGACAGTCATGAGAAAAATATTAGTGGCAGCAGTAGCAAGAGTATTTAAACCAGGTTGTAAATTTGATAATATGGCAG
TTTTAAGTGGACCACAGGGAATAGGTAAAAGTACTTTTATTAAAAAACTAGGTAAAAAGTGGTACTCTGACAGCTTAACT
ACTGTAACTGGTAAAGAAGCATATGAGCAATTACAGGGTGTATGGCTCTTAGAAATGGGAGAAATGATGGCAACAAAGAA
AGCTGATATTGAAGCTACAAAACATTTTTTATCCAAGCAGGAAGATATCTACAGGGTAGCATATGGCAGAAGGACAAGCA
GATTCCCACGTCAGTGTGTAATTATAGGTACTACAAATGATAGGGAGTTCTTAAGAGATAAAACCGGTAATAGAAGGTTT
TGGCCAATAGATGTAGGTGTAACAGCCCATAGCAAAAGTGTATTTAAAGATATGGACAGCTATACAATAGATCAAATATG
GGCTGAGGCTGTAGCACTCTGGAATGATGGTGAGACTTTGTATTTAAGTGCTGATGAAGAAAAAGAAGCACAAAAACAGC
AGGAGGCTCATAGCGAGGAAAGTGCAAAGGCTGGATTAATTGAAGAATATTTAAACAAGCCTTTACCTGAAAACTGGTAT
AGCCTGTGTATGGCGGATAGGAGAAATTATATACATGGATCTGAATTTGGTGATATACCTGAAGGAAATATACAAAGAAC
TAAAACCTGTGTAATGGAAATATGGTGTGAGCTTTTCAATGGTGATCCAAAGCATCTTACACCAATTCAGTCACGTGAAA
TTAATGATATCCTTAAAAGCTTAAAGGGATGGAAAAAATATAATAATTCCTTAACATTTGGGAAAATTTATGGGAAACAA
AGAGCTTACACACGCAAAATTTAG

Protein sequence :
MEYTARNSPKIKIKYDGSITLATGKSKHEKHWKNKNLLYSALVEKLSNTTRTPETYTEYKKMSKSERDRIKDIGGFVGGS
LKNGRRKAENVANRTLITLDIDYANGDIWSSIELLWDFNCLMYSTHTHAPDNQRLRLVIPLSRPVLPDEYQAIARIIADD
LGIDQFDDTTYEPSRLMYWPSTSSNGEYVFKVQDLPWLNPDEVLDRYTFGWQDVSYWPESSRTRAKINTAIKKQEDPLNK
KGVIGAFCRTYSISEAIDEFLKDVYVPGMDETRYTYAEGSTAGGVVVYEDKFSYSHHGTDPASEILCNAFDLVRIHKFGG
LDDEAKPDTPANRLPSFTKMTEFASNDEKVIQTLGKERMEKAQEDFGIVEDETDTRWLKDLEYTDNGKLRSTISNFLLVI
ENEPLLKGKIAYNEFSNRAVVIGQLPWRKKDNMSDWNDTDDSGLREFIEKYYKINSTTKCADALALSFEKHSFHPIKEYL
DSLLWDGIKRVDTLLIDYLGAEDNSYVRTVMRKILVAAVARVFKPGCKFDNMAVLSGPQGIGKSTFIKKLGKKWYSDSLT
TVTGKEAYEQLQGVWLLEMGEMMATKKADIEATKHFLSKQEDIYRVAYGRRTSRFPRQCVIIGTTNDREFLRDKTGNRRF
WPIDVGVTAHSKSVFKDMDSYTIDQIWAEAVALWNDGETLYLSADEEKEAQKQQEAHSEESAKAGLIEEYLNKPLPENWY
SLCMADRRNYIHGSEFGDIPEGNIQRTKTCVMEIWCELFNGDPKHLTPIQSREINDILKSLKGWKKYNNSLTFGKIYGKQ
RAYTRKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
MW1408 NP_646225.1 hypothetical protein Not tested ¥ÕSa2 Protein 3e-180 49
SAUSA300_1410 YP_494107.1 virulence-associated protein E Virulence ¥ÕSa2 Protein 3e-180 49
SAOV_0312 YP_005735829.1 virulence-associated protein E Virulence ¥ÕSa1 Protein 0.0 49
SH1781 YP_253696.1 hypothetical protein Not tested ¥ÕSh1 Protein 0.0 48