Gene Information

Name : CLJU_c35190 (CLJU_c35190)
Accession : YP_003781662.1
Strain : Clostridium ljungdahlii ATCC 49587
Genome accession: NC_014328
Putative virulence/resistance : Virulence
Product : ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 3840470 - 3841180 bp
Length : 711 bp
Strand : +
Note : -

DNA sequence :
ATGGAACCAATTTTAGAAGTAAAAAATTTAAGTAAATATTATAAAAATAAAAAAGTAATTGACAACATCAATATAAAGGT
ATTCAAAGGAGACATCTATGGTTTTATAGGTCCAAATGGAGCTGGAAAAACAACAACTATAAAAACTATTTTACGTTTAC
TAAAACCTTCAAGTGGTGAAGTCTTCATAGATGGCAAAAATGTATTTAAAAATGGAGAAAACAATCCTTCAGATATAGGA
GCTATGATAGACTATCCAAGCTTTTACAACAACTTATCTGGATATAAAAATTTAATGCTCTATGCAAATGTCCTGAATCT
AAGCAAAGAAAGAGTTTATGAGGTTTTGGAATTAGTAAAATTAATGGATGATAAAGATAAAAAAGTAAGCAATTATTCTA
TGGGAATGAAGCAGAGGCTTGCAGTGGCAAGAGCATTTTTATCAAAGCCCAAAATTGTAATATTAGATGAACCAACTAAT
GGCCTTGACCCGGAAGGAGTAAGAGATATGAGAAATTTAATTAACAAATTAGCTAGGGAAAATGATACAACTTTCATATA
CTGTTCTCACATTTTAAATGAAGTACAAAATATATGTAATAGAGTTGCAATGATAAATAAAGGCAGAATAATTATTGAAG
ATTCTATGAAAAATCTGCTTAATAGTAGTAACTCTTTAGAAGATTATTTTATGAAAGCAGTAGGACTTTAA

Protein sequence :
MEPILEVKNLSKYYKNKKVIDNINIKVFKGDIYGFIGPNGAGKTTTIKTILRLLKPSSGEVFIDGKNVFKNGENNPSDIG
AMIDYPSFYNNLSGYKNLMLYANVLNLSKERVYEVLELVKLMDDKDKKVSNYSMGMKQRLAVARAFLSKPKIVILDEPTN
GLDPEGVRDMRNLINKLARENDTTFIYCSHILNEVQNICNRVAMINKGRIIIEDSMKNLLNSSNSLEDYFMKAVGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09830 YP_002510959.1 lantibiotic transport ATP-binding protein Not tested PPI-1 Protein 4e-25 51
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 8e-32 44
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 5e-13 42
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 5e-13 42
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 5e-13 42
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 5e-13 42
SH2304 YP_254219.1 ABC-type multidrug transport system, ATPase Not tested ¥ðSh1 Protein 2e-21 41