|
Name : CLJU_c03390 (CLJU_c03390) Accession : YP_003778523.1 Strain : Clostridium ljungdahlii ATCC 49587 Genome accession: NC_014328 Putative virulence/resistance : Unknown Product : phage related DNA polymerase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0749 EC number : 2.7.7.7 Position : 353469 - 355418 bp Length : 1950 bp Strand : + Note : - DNA sequence : ATGAAATTTATTTCAATAGACATTGAGACCTTTTCCAGTGTTAATCTTCAGAAGTCCGGTGTTTATCGCTATGCCGAGAG CGAGGATTTTGATATTCTTCTGTTTGGATATTCAGTAGATGGAGGAGAGGTGAAGGTGATTGACCTTGCTAGAGGTGAGA AAATTCCAATTGAAATTATAAATGCTCTTACTGATGATTCTGTTATTAAATGGGCATTCAACGCACAATTTGAAAGAATC TGCTTATCAAAGTGGCTTGGTATGAAAGCAGGTACTTATCTTTCTCCTAAGTCATGGCAGTGCACTATGATTTGGGCGGC AACTTTAGGACTTCCATTATCTCTTGAGGGTGTTGGAGCGGTATTGGGTTTTAAAAAACAAAAATTATCACAAGGTAAAA ATCTAATTAAATATTTTTGTATTCCATGTTCTCCAACTAAATCAAATGGTGGACGTACTCGGAATCTACCACACCATGAC ATAGAAAAATGGAAAATGTTCACCTTCTATAACAAGCGTGATGTGGAAACAGAAATGGCGATACAAAATAAATTATCTAA ATTTCCTGTATCCAAAACCGAATGGCAGAATTACCACTTAGACCAGATAATCAATGACGGTGGTATTAATCTTGATATGG ATTTTGTAAGACAGGCAATTTCCTGCGATGAAAAATTCAAAGCAGAAAATATTAAAAAAGCAAAGGAGTTAACAGGTCTT GAAAACCCTAATTCTCCTGCACAATTAAAGGATTGGCTTCTTAAGCAAGGTATGAAAACAGATTCTCTTTCCAAGGCAGT AGTTTCGGAGTTACTTCAAGATTCAGATGGAGAAATACATGAGGCGCTTTCAATTAGACAGCAGCTTGCAAAAAGCAGCG TAAAGAAATATACATCAATGGAAAATGTGGTTTGTAGTGACAGCAGAGCCAGAGGTTTAATTCAGTTTTATGGTGCAAAT AGAACAGGGCGCTATTCAGGTAGGCTCATCCAGGTGCAGAACCTGCCGCAAAACCATCTTCCGGATTTAAAGCAGGCTCG TTCTTTAGTGAAATCTGGAAACTTTACAGCTTTAGATTTACTTTATGACAGCATTCCAAGTGTGCTATCAGAACTAATTA GAACAGCTTTTATACCAAGGTATGGGAGTAGGTTTATTGTAGCAGATTTTTCAGCAATTGAGGCTCGTGTTATTGCATGG CTTGCTGGTGAGAGATGGAGAATTGATGTATTTGCAGGTGGTGGAGATATCTATTGTGCTTCAGCATCACAGATGTTTAA TGTTCCTGTTAAGAAAAACGGTATTAACGGGCATTTAAGGCAGAAAGGTAAAATAGCAGAATTAGCCTTAGGCTATGGCG GCTCAGTAGGGGCACTTAAAGCGATGGGAGCAATTCAAATGGGACTTGTTGAAGATGAGTTAAAACCTATCGTAGATGCG TGGAGAAATTCTAATCCTAATATAACTTCTCTTTGGTGGAGGATAGACCGTGCAGTAAAAACTGTAGTAAAAACAAAACA ACCAATTGAGATATATGGTATCGGAATTTTTTATCAAAGCGGAATTCTCTTTATTAAGCTGCCAAGTGGAAGAAGGCTTG CATATGTGAAACCTCTTATTGGAGAGAACAGATTTGGTGGCGAGTCTGTTACCTATGAAGGCGTTGGTGGTACGAAAAAA TGGGAACGAATAGAAAGCTATGGTCCTAAGTTTGTAGAGAATATTGTTCAGGCAATTAGCCGTGATATTTTAGCAGAAGC AATGCTTAAATTAGCTACCCATGAATTTCAAATTGTAATGCACGTTCATGATGAGGTGGTAATAGAAGCACCAAATAAAG TATCTTCTGTAGAAGAAATATGTAGGATTATGAGTGAAACACCAGCATGGGCAAAAGGACTGATTCTTAATGCTGATGGC TATGAATGTGAATTTTATAAAAAGGAATAG Protein sequence : MKFISIDIETFSSVNLQKSGVYRYAESEDFDILLFGYSVDGGEVKVIDLARGEKIPIEIINALTDDSVIKWAFNAQFERI CLSKWLGMKAGTYLSPKSWQCTMIWAATLGLPLSLEGVGAVLGFKKQKLSQGKNLIKYFCIPCSPTKSNGGRTRNLPHHD IEKWKMFTFYNKRDVETEMAIQNKLSKFPVSKTEWQNYHLDQIINDGGINLDMDFVRQAISCDEKFKAENIKKAKELTGL ENPNSPAQLKDWLLKQGMKTDSLSKAVVSELLQDSDGEIHEALSIRQQLAKSSVKKYTSMENVVCSDSRARGLIQFYGAN RTGRYSGRLIQVQNLPQNHLPDLKQARSLVKSGNFTALDLLYDSIPSVLSELIRTAFIPRYGSRFIVADFSAIEARVIAW LAGERWRIDVFAGGGDIYCASASQMFNVPVKKNGINGHLRQKGKIAELALGYGGSVGALKAMGAIQMGLVEDELKPIVDA WRNSNPNITSLWWRIDRAVKTVVKTKQPIEIYGIGIFYQSGILFIKLPSGRRLAYVKPLIGENRFGGESVTYEGVGGTKK WERIESYGPKFVENIVQAISRDILAEAMLKLATHEFQIVMHVHDEVVIEAPNKVSSVEEICRIMSETPAWAKGLILNADG YECEFYKKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SEQ_2073 | YP_002747288.1 | phage DNA polymerase | Not tested | ¥ÕSeq4 | Protein | 6e-154 | 50 |
| MW1425 | NP_646242.1 | DNA polymerase | Not tested | ¥ÕSa2 | Protein | 1e-149 | 50 |
| polA | YP_494120.1 | phage related DNA polymerase family A | Not tested | ¥ÕSa2 | Protein | 6e-148 | 49 |
