Gene Information

Name : CLJU_c32950 (CLJU_c32950)
Accession : YP_003781443.1
Strain : Clostridium ljungdahlii ATCC 49587
Genome accession: NC_014328
Putative virulence/resistance : Resistance
Product : transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG2207
EC number : -
Position : 3601524 - 3601874 bp
Length : 351 bp
Strand : -
Note : -

DNA sequence : 
ATGAATTACAATGCTTGTATTAGGAAGTCTATTGAATATATAGAGCATAATTTAGAAAATAAAATAGAACTTGAAGATAT
TGCTCACAAAGTCTTCCTGTCAAAATATCATTTTCATAGAATTTTTCATTCTGTTGTTGGAGAACCTGTAGCTGAATATA
TAAGAAGGAGAAGACTTAAAGAAGCTGCAAATGAGCTTTTAAATACACGTAATAAAATTGTAGATATAGCATTAAAGTAT
CAGTTTAGTTCTCAGGAATCTTTTACAAAGGCCTTCAAAAAACTTTATGGAATGCCTCCAAGGGAATTCAGAAGAAATAG
AACTGCAAGTAGTATTTCTATGGCAGCTTAA

Protein sequence : 
MNYNACIRKSIEYIEHNLENKIELEDIAHKVFLSKYHFHRIFHSVVGEPVAEYIRRRRLKEAANELLNTRNKIVDIALKY
QFSSQESFTKAFKKLYGMPPREFRRNRTASSISMAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 4e-18 46
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 4e-18 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLJU_c32950 YP_003781443.1 transcriptional regulator NC_010558.1.6276025. Protein 2e-18 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLJU_c32950 YP_003781443.1 transcriptional regulator VFG1038 Protein 1e-18 46