Gene Information

Name : CLJU_c30180 (CLJU_c30180)
Accession : YP_003781168.1
Strain : Clostridium ljungdahlii ATCC 49587
Genome accession: NC_014328
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3593
EC number : -
Position : 3331905 - 3333971 bp
Length : 2067 bp
Strand : -
Note : -

DNA sequence :
ATGAATTTGAAAAAATTGAGATTGTGTAGATTTCGTTGTTTTGGTGATGATGAACAGGAAATTTACTTTAATAACTTAAC
TACGTTAATTGGCAATAATAGCTGCGGAAAAACAACAGTATTACAGGCTTTATTAAAATTATTTTCATATAATTCTAATG
AACGAAATTTAATAAGAAGTGATTTTTTCTTACCAAAAGGTGTAAAGCCTGATGAAATGCAAAAACAAGATTTATATATC
GAAGCAGTATTTGATTTTCCTGAATTAGATGATAAAAATATAGAAAATAAGGATTCTATTCCAATATTTTTTAGACATTT
TATAGTTGAAGAGCCTAGTGGAAAGCCTTATTTACGAATAAGATTAGAAGCTTCGTGGGAAAAAGGAAACAATGTAGACG
GCTCTATTGAAAGCAGGATAAGTTATATTGTATGTCCTGAAGAGGATCAAATTAAGGAAGAAGATAGAAAAATTGCAAAT
CGCCATGAACTGGATAAAATAAGGATGATTTATGTTCCAGCAGTTAGAGATCCATCGAAACAGCTTAGAAATGTGTCTGG
TACTATGATGTATCAAATTATGAAGAGCATTAATTGGAAAGATGATACCAAAGAATCTGTTGATAAAAAAATAGAAGAAT
TGAATGAAGAATTTGAGAAAGAAACAGGAATTTCCATTTTAAAAGATTCAATTCGTACTCAATGGAAGAATTACGATTCG
GATTATAGGTATTCAAATGCTGATATGAGATTTAATAATGTTGATATGGATTCCATGCTTAAAGGATCAGAAGTTGTTTT
TTCACCTACAGTTACAGGAAGAAAATATTGTATTGATGAAATGGGTGATGGATTACGTTCTTTGTTTTATATATCATTGG
TCAATAGTATGTTAGAAGTAGAAAGTGTAATTCGTAAGGAAATGAATTTGAAGAGCGAAAAACGTTCTTTTAATATTACA
CCTCCTGTACTCACGTTAGTTGCTGTGGAGGAACCAGAAAATCATATTGCACCGCATTTAATAGGAAAATTAAAAAATAA
ACTTAATGATATTGCAGAAAAAGAAGATGCCCAAACAATTATAACGTCACATTCTCCAGCAATTGTAAAGAGGATAGATC
CTGAGGATATTAGATATCTTAGAATGTATCCTGATGATTTATCAACTAAGGTGAAAATAATACATTTTCCCTTAGAAGAA
AAATATGAGGACAGATATAAATACATAAAAGAAGCAGTACAAGCTTATCCTGAAATTTATTTCGCAAGATTAGTTGTATT
AGGAGAAGGAGATAGTGAAGAGATAGTGATACCAAAACTATTGGAATTAAGTAATGGAAATGTTGACAGTAGTGGAATAT
CAATTGTTCCATTAGGGGGACGTTTTGTTAATCATTTTTGGAGACTACTCAAAGATTTGGATATACCGTTTGTTACTTTA
CTTGATTTAGATCAAGAAAGATATGGTGGTGCCTGGGGAAGAATTAAGTATGTACTTCAGCAATTAATTGAAGTTGGCGA
AAATAGAAAGAAATTATTAAAATGTAAAGATGGTATTTTATCAAAAGATGATTTTGAAGGTATGATTAATTGGACAGTTG
AAAAAGATGATAAGTGTATGTTAAGTTGGATTGAACTTTTGGAGAATTATGATGTATTTTTCTCAGCTCCATTAGATATA
GACTTTATGATGCTTGAATGTTTTGGTGATACTTATAAATCTATATTAGAAAATAATGAGGGACCTTATATAAAGGGTAA
AGAGGATGGAAAAGGGAAAATTAGTTATATTGAAGAAAATGAAATTGATAGTGCTGAGTATAAAGAAAGAGTAGAACATG
ATGTACATTGTACCCTAAAGGAAAATGGTGGTGATGGACAATCTTATTCTAAAAAACAAAAAATGCTTATGGTATGGTAC
AATTATTTTTTCTTGAATAGAGGGAAACCAAGTACACATTATTTAGCCTTATCAAAAATAGATGATAAAGAACTAATGGA
TAATGCTCCAGATGTCTTAAAACGCATGATAAAAAGAATAGAAGAAAAATTAAATCCTACCATATAG

Protein sequence :
MNLKKLRLCRFRCFGDDEQEIYFNNLTTLIGNNSCGKTTVLQALLKLFSYNSNERNLIRSDFFLPKGVKPDEMQKQDLYI
EAVFDFPELDDKNIENKDSIPIFFRHFIVEEPSGKPYLRIRLEASWEKGNNVDGSIESRISYIVCPEEDQIKEEDRKIAN
RHELDKIRMIYVPAVRDPSKQLRNVSGTMMYQIMKSINWKDDTKESVDKKIEELNEEFEKETGISILKDSIRTQWKNYDS
DYRYSNADMRFNNVDMDSMLKGSEVVFSPTVTGRKYCIDEMGDGLRSLFYISLVNSMLEVESVIRKEMNLKSEKRSFNIT
PPVLTLVAVEEPENHIAPHLIGKLKNKLNDIAEKEDAQTIITSHSPAIVKRIDPEDIRYLRMYPDDLSTKVKIIHFPLEE
KYEDRYKYIKEAVQAYPEIYFARLVVLGEGDSEEIVIPKLLELSNGNVDSSGISIVPLGGRFVNHFWRLLKDLDIPFVTL
LDLDQERYGGAWGRIKYVLQQLIEVGENRKKLLKCKDGILSKDDFEGMINWTVEKDDKCMLSWIELLENYDVFFSAPLDI
DFMMLECFGDTYKSILENNEGPYIKGKEDGKGKISYIEENEIDSAEYKERVEHDVHCTLKENGGDGQSYSKKQKMLMVWY
NYFFLNRGKPSTHYLALSKIDDKELMDNAPDVLKRMIKRIEEKLNPTI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU98_0942 YP_001200500.1 hypothetical protein Not tested 89K Protein 6e-130 48
SSU05_0935 YP_001198301.1 hypothetical protein Not tested 89K Protein 9e-163 48