Gene Information

Name : CLJU_c27190 (CLJU_c27190)
Accession : YP_003780879.1
Strain : Clostridium ljungdahlii ATCC 49587
Genome accession: NC_014328
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3002436 - 3003119 bp
Length : 684 bp
Strand : +
Note : -

DNA sequence : 
ATGGAGTTTTTAAAAATTGAAAATTTATGCAAGGTCTACGGCACTGGTGAAAATCAGGTTACCGCGCTTGACCATGTTTC
ACTTACAATAGAAAAAGGAGGATTTACTTCAATTATCGGTTCCTCTGGCTCTGGTAAATCCACTTTGCTGCATGCTATCG
CTGGTGTGGACGTGCCAACAAGCGGAAAGATATATTTGGAGAGTCAGGATGTATATGCCCAGAACAATGAAAAACTTGCC
ATCTTCCGCAGGCGTCAGGTTGGACTGATTTACCAGTTTCACAACCTCATTCCCACTCTGAATGTTGTTGAAAACATCAC
ATTGCCTATACTGATGGACAAACGAAAGGTCAATAAGAAGAGGCTGAATGAATTGCTGGAATTGCTTGGGCTAAAGGGAC
GAGAAACACATTTACCCAATCAGCTTTCAGGCGGTCAGCAGCAGCGTGTTTCCATAGGACGTGCTTTGATGAACGCTCCG
GCGGTCATGCTTGCCGACGAGCCAACGGGTAGTTTGGACAGTCGAAATGGACATGAAATTATAAAGCTGCTTAAAGAAAG
CAATAAAAAATATAATCAGACACTTATTGTTGTTACACATGACGAAAATATTGCTTTGCAAGCAGACCGCATTATCGGCA
TATCAGACGGCAAAGTAGTGAGAGACGAGAAGGTGAGACCATGA

Protein sequence : 
MEFLKIENLCKVYGTGENQVTALDHVSLTIEKGGFTSIIGSSGSGKSTLLHAIAGVDVPTSGKIYLESQDVYAQNNEKLA
IFRRRQVGLIYQFHNLIPTLNVVENITLPILMDKRKVNKKRLNELLELLGLKGRETHLPNQLSGGQQQRVSIGRALMNAP
AVMLADEPTGSLDSRNGHEIIKLLKESNKKYNQTLIVVTHDENIALQADRIIGISDGKVVRDEKVRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-22 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-23 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-23 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-23 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLJU_c27190 YP_003780879.1 ABC transporter ATPase CP001581.1.gene798.p Protein 4e-43 53
CLJU_c27190 YP_003780879.1 ABC transporter ATPase CP001581.1.gene598.p Protein 4e-37 52
CLJU_c27190 YP_003780879.1 ABC transporter ATPase NC_012469.1.7686878. Protein 1e-26 41