Gene Information

Name : metB (CLJU_c24380)
Accession : YP_003780598.1
Strain : Clostridium ljungdahlii ATCC 49587
Genome accession: NC_014328
Putative virulence/resistance : Resistance
Product : cystathione gamma-synthase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 2.5.1.48
Position : 2702743 - 2703885 bp
Length : 1143 bp
Strand : -
Note : -

DNA sequence :
ATGAATATAGAATCATTATTAATACACGGTGGGGTTGATGGGGATAAAACTACAGGAGCAGTTAGTGTTCCAATATATCA
GACGTCAACCTATAAGCAAAGTGGACTTGGAGAAAACAAAGGATATGAATATTCAAGAACGGGAAATCCAACTAGAGAAG
CACTTGAAAAACTTATAGCAGAACTTGAAGAAGGTAAAAATGGACTTGCATTTGCCTCAGGAATGGCAGCTATAACTGCC
GTGCTGACACTTTTCAAAAGTGGAGATAAAATAATAATATCAGACAACGTATATGGTGGAACTTACAGGGTACTTGATAA
AGTATTTAAAAATTTTGATTTAAACTACGAATTGATTGATACAAGTGACCTAGAAAAAGTTGAAAGTAGTATTACAAAAG
AAGTAAAGGCAATATATATTGAATCCCCAACTAATCCACTTATGGATATAACAGATATAAAAAAGATATCTGAAATTGCA
AAGAAAAATAACCTTTTGACTATTGTAGACAACACTTTTATGACACCTTATCTTCAAAAACCAATAGAACTTGGAGCAGA
TATAGTACTTCACAGTGCAACCAAGTATTTAGGTGGACACAGCGACTTAGTTGCAGGACTTGTTGTTGTAAATGATGAAA
AGTTAGCTGAAAGATTGTATTTTATACAAAATTCAACAGGTGGAGTATTAGGACCTTTTGACAGCTGGCTTTTGATAAGG
GGAATAAAAACATTGTCAGTTAGAATGGATAGACACCTTGAAAATGCAGCCTATATAGCTCAATTTTTAAATGAAAGTCC
TTTTGTAGAAAAAGTCTATTATCCGGGACTTGAGAGTCATAAAGGCCATGAAATTCAGAAAAAACAGGCTAGAGGTTATG
GAGCTATAATTTCCTTTGTACTGAAAAAGGATATAGATATAAAGAAATTTTTTAAGAATTTAAAACTTATAACTTTTGGA
GAAAGTCTTGGGGGAGTGGAATCTTTAATGTGCCATCCTGCTACTATGACCCATGCAGCTATACCTTATGAAATAAGGCA
AAAAGTTGGAATTGTAGATAATTTGGCAAGACTTTCTGTTGGAATAGAAAATAAAGAAGATTTGGTAAAAGACTTAAAAA
AGTCAATGGAGCTTTCAAAATAG

Protein sequence :
MNIESLLIHGGVDGDKTTGAVSVPIYQTSTYKQSGLGENKGYEYSRTGNPTREALEKLIAELEEGKNGLAFASGMAAITA
VLTLFKSGDKIIISDNVYGGTYRVLDKVFKNFDLNYELIDTSDLEKVESSITKEVKAIYIESPTNPLMDITDIKKISEIA
KKNNLLTIVDNTFMTPYLQKPIELGADIVLHSATKYLGGHSDLVAGLVVVNDEKLAERLYFIQNSTGGVLGPFDSWLLIR
GIKTLSVRMDRHLENAAYIAQFLNESPFVEKVYYPGLESHKGHEIQKKQARGYGAIISFVLKKDIDIKKFFKNLKLITFG
ESLGGVESLMCHPATMTHAAIPYEIRQKVGIVDNLARLSVGIENKEDLVKDLKKSMELSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-91 54
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 5e-93 54
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 8e-64 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metB YP_003780598.1 cystathione gamma-synthase BAC0207 Protein 7e-58 43