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Name : pdp (CLJU_c18160) Accession : YP_003779981.1 Strain : Clostridium ljungdahlii ATCC 49587 Genome accession: NC_014328 Putative virulence/resistance : Unknown Product : pyrimidine-nucleoside phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : 2.4.2.2 Position : 1969264 - 1970565 bp Length : 1302 bp Strand : + Note : - DNA sequence : ATGAGAATGGTAGACGTAATTGAAAAGAAACGTGAAGGAGGAGAATTAACTACAGAAGAGATTAAATTTTTTATAGAAGG TTATACTAAAGGCTCAATTCCTGATTACCAGGCAAGTGCACTTGCAATGGCAATTTACTTTCAGGATATGACTGATCGTG AGAGAGCAGATCTTACTATGGCAATGGTTCATTCTGGAGAAACTATTGATCTTTCAGCAATTGAGGGTGTAAAAGTTGAT AAACATTCAACAGGTGGAGTAGGAGATACAACAACACTTGTTCTTGCACCTATGGTTGCATCTCTAGGCGTACCTGTTGC AAAGATGTCAGGACGTGGACTTGGACATACAGGTGGAACTATTGATAAACTTGAATCAGTAAAAGGATTCCATGTTGAAC TTACAAAAGAACAATTTATTGATTTTGTTAACAACAGTAAAGTTGCAGTTATGGGCCAAACTGGTAATTTAACTCCAGCA GATAAAAAGTTATATGCTCTTCGTGATGTAACTGGAACTGTAAATTCAATTCCACTAATTGCAAGTTCAATAATGAGCAA GAAGATTGCAGCAGGAGCAGATGCAATAGTACTTGATGTTAAAACTGGTGCAGGAGCTTTCATGAAGACGGAAGAAGATT CAGAAAAACTTGCACATGCTATGGTTAAAATAGGCAATAATGTAGGTAGAAAGACTATGGCAATAATTTCTGATATGTCT CAACCTTTGGGATTTGCAATTGGAAATGCTCTTGAAGTAAAAGAAGCTATTGATACATTAAAAGGAGAAGGACCAGAAGA TTTAACAGAGCTTGTTTTAACTCTTGGAAGCCAGATGGTTGTACTTGGTAAAAAGGCAAAGACGTTAGAAGAAGCAAGAG AGAAATTACTCGAAGCAATAAAGAGTGGTAAAGCACTAGAAAAATTCAAGGAATTCCTTAAAAATCAAGGTGGAGATCCA TCAGTTGTGGACAATCCTGAAAAATTACCTCAAGCAAAATATAAAATACCTGTTCCTGCAAAGGAAGGAGGATATGTTTC AAATATGGTAGCTGACCAAATTGGTATAGCAGCAATGCTTTTAGGTGCGGGAAGAGCTACAAAAGAAGATAAAATTGATT TAGCTGTAGGAATAGTTCTTAATAAAAAAGTTGGAGATAAGGTAGAAAAAGGTGAATCACTTATGACTATTTATTCAGAC CGTGAAGATGTAGAAGATGTAAAAGCTAAGATTTACGAGAATATCACTATCAGTGCTCATGCAGAAAAACCAGTTCTGAT CCACAAGATTATAACAGAATAA Protein sequence : MRMVDVIEKKREGGELTTEEIKFFIEGYTKGSIPDYQASALAMAIYFQDMTDRERADLTMAMVHSGETIDLSAIEGVKVD KHSTGGVGDTTTLVLAPMVASLGVPVAKMSGRGLGHTGGTIDKLESVKGFHVELTKEQFIDFVNNSKVAVMGQTGNLTPA DKKLYALRDVTGTVNSIPLIASSIMSKKIAAGADAIVLDVKTGAGAFMKTEEDSEKLAHAMVKIGNNVGRKTMAIISDMS QPLGFAIGNALEVKEAIDTLKGEGPEDLTELVLTLGSQMVVLGKKAKTLEEAREKLLEAIKSGKALEKFKEFLKNQGGDP SVVDNPEKLPQAKYKIPVPAKEGGYVSNMVADQIGIAAMLLGAGRATKEDKIDLAVGIVLNKKVGDKVEKGESLMTIYSD REDVEDVKAKIYENITISAHAEKPVLIHKIITE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 9e-82 | 45 |
