Gene Information

Name : CLJU_c18090 (CLJU_c18090)
Accession : YP_003779974.1
Strain : Clostridium ljungdahlii ATCC 49587
Genome accession: NC_014328
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1962284 - 1962991 bp
Length : 708 bp
Strand : +
Note : -

DNA sequence : 
GTGATAATTAAATTGGAGAATTTAGTTAAGATATATGATACTGGTGCTGTAAAACTTAAGGCTTTAAAGGAAATTAATTT
AGAAATTGAAAAGACAGAATATGTAGCTATAATGGGGGCATCAGGATCAGGTAAGTCTACTCTTATGAATGTACTTGGTT
GTTTAGATAAACTTACAGATGGAAAATATTATTTAGATGGTGTAGATATATCATCATTAGATGATAACAGTTTAGCTGAT
ATAAGAAACAAGAAAATAGGTTTTGTATTTCAAGCATTTAACTTACTTCCCAAACTTACAGCTATAGCTAATGTGGAATT
GCCCATGATGTATGCAGGAGTATCTAAAAGAGAGAGAGAGAAAAAAGCTAAATGGGCTCTAGATAGGGTTGGATTATCTC
ATAGACTTCATCATAAACCTAATGAAATGTCTGGTGGACAAAAACAGAGGGTAGCTATTGCAAGAGCTTTAGTAAATGAT
CCATCTATAATACTTGCAGATGAACCTACAGGAAACTTGGATAGTATTTCTAGTGAAGAAATAATGGAGATTTTTCAGCA
ATTAAATGATGAAGGAGTAACTATTGTTATGGTTACACATGAACTTGACATAGCCATGCATACAAAAAGAACCATAGTTT
TTAAGGATGGAGCTATAATTTCAGATAATCCAGTAGAAAGAAGAACTATAGTTGGGGGGAAGAAGTAA

Protein sequence : 
MIIKLENLVKIYDTGAVKLKALKEINLEIEKTEYVAIMGASGSGKSTLMNVLGCLDKLTDGKYYLDGVDISSLDDNSLAD
IRNKKIGFVFQAFNLLPKLTAIANVELPMMYAGVSKREREKKAKWALDRVGLSHRLHHKPNEMSGGQKQRVAIARALVND
PSIILADEPTGNLDSISSEEIMEIFQQLNDEGVTIVMVTHELDIAMHTKRTIVFKDGAIISDNPVERRTIVGGKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-34 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-32 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-33 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLJU_c18090 YP_003779974.1 ABC transporter ATPase NC_012469.1.7686878. Protein 4e-60 58
CLJU_c18090 YP_003779974.1 ABC transporter ATPase NC_008702.1.4606598. Protein 6e-49 47
CLJU_c18090 YP_003779974.1 ABC transporter ATPase CP001581.1.gene798.p Protein 9e-37 44
CLJU_c18090 YP_003779974.1 ABC transporter ATPase CP001581.1.gene598.p Protein 7e-35 41