Gene Information

Name : CLJU_c15490 (CLJU_c15490)
Accession : YP_003779715.1
Strain : Clostridium ljungdahlii ATCC 49587
Genome accession: NC_014328
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1681050 - 1681712 bp
Length : 663 bp
Strand : +
Note : -

DNA sequence :
ATGATAGACATTAAAAATGTATGTAAATACTATACCATGGGAGATACAGTAGTAAAGGCATTGGATGATATAAATTTAAG
TATAGATGAAAATGAATTTATATCTATTATAGGACCTTCAGGATCAGGAAAATCAACTCTTATGAATATACTAGGATGCT
TGGATATACCTGATTCCGGAAGCTATATATTTGATAATGTAAATGTAGAAAATGCAAGCGAAAATGAGTTAAGCCTAATT
AGAAACAAGCAGATAGGTTTTATATTTCAAAATTTTAATTTATTGCCTAAGTTAAATGCAGTAGAAAATGTAGAAGTTCC
CCTTTTATATAGAGGAATAAACCAAAAGGAATGTAGAAAGTTAGCATTAGACTATCTAGAGAAGGTGGGGCTTAAAGGAA
GAGAACATCATAAACCAAATCAGTTATCTGGAGGACAGCAGCAGAGAGTAGCTATCGCAAGAGCTTTAGTAGGAAGTCCA
AAGATTATCTTAGCTGATGAACCAACAGGTGCACTGGATAGTAAAACAAGTGCTGAGCTTATGGAATTTATCAAAGAACT
CCATAAAAAGGGACAAACTATAATACTTATAACTCATGATCCTAATGTGGCTAAACAAGCTGAGAGAATCATAACTATAA
GAGATGGTAAATTATATGCATAG

Protein sequence :
MIDIKNVCKYYTMGDTVVKALDDINLSIDENEFISIIGPSGSGKSTLMNILGCLDIPDSGSYIFDNVNVENASENELSLI
RNKQIGFIFQNFNLLPKLNAVENVEVPLLYRGINQKECRKLALDYLEKVGLKGREHHKPNQLSGGQQQRVAIARALVGSP
KIILADEPTGALDSKTSAELMEFIKELHKKGQTIILITHDPNVAKQAERIITIRDGKLYA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-28 42
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 5e-25 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-27 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-28 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-28 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLJU_c15490 YP_003779715.1 ABC transporter ATPase NC_012469.1.7686878. Protein 1e-53 56
CLJU_c15490 YP_003779715.1 ABC transporter ATPase CP001581.1.gene598.p Protein 8e-39 47
CLJU_c15490 YP_003779715.1 ABC transporter ATPase CP001581.1.gene798.p Protein 8e-40 46
CLJU_c15490 YP_003779715.1 ABC transporter ATPase NC_008702.1.4606598. Protein 1e-37 44
CLJU_c15490 YP_003779715.1 ABC transporter ATPase NC_012469.1.7686946. Protein 4e-29 42