Gene Information

Name : CLJU_c13790 (CLJU_c13790)
Accession : YP_003779549.1
Strain : Clostridium ljungdahlii ATCC 49587
Genome accession: NC_014328
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 1479260 - 1480171 bp
Length : 912 bp
Strand : +
Note : -

DNA sequence :
ATGTCACAAGAAATTTTACAAACAAAAAATTTAACAAAAAATTTTAAGGACTTTAAGGCAGTAAAAGGAATAGATTTATC
AATAAAAAAGGGTAGGGTATATGGATTTTTAGGTCCCAACGGTGCAGGGAAATCCACAACTATAAGAATGCTCTTGGGAC
TTATAAAGCCAACGAAGGGGGAAGTTAAAATATTTGGTAAAGACTTAAGAAAAAATAGAATGAGCATTTTAAAAAAAATA
GGATCTATGGTTGAAGCACCATCTTATTATGGAAATTTAACAGCATATGAAAATTTACAGGTAACAGCAGAACTCCTAGA
ACTTGACCATAAGTATATTGATGAAGTTTTGAAAGTTGTAAAACTCACTGAATGGAAAGATAGACAGGCCAGTAAGTTTT
CACTTGGTATGAAACAAAGACTTGGTATTGCCCAGGCACTTATATCGAAACCAGAACTTTTAATACTGGATGAACCTACT
AATGGACTTGATCCATCTGGAATTCATGAAATAAGAGGACTTATCAAAGAACTTCCCAAACTCTATAACATGACAGTTAT
TATATCAAGTCATAATTTGAGTGAAATTGAACTCATAGCAGATGATATTGGAATTATAAATAGAGGAAAGATGTTGTTTC
AAGGAACACTTGAAGAACTTCATTCAAAGAGTAAAGGACAAATTTGTATAGAATCTAAGGATTTAAAGAAGCTAGAAGGT
ACGCTAAATAATAGTGGATATAAGTATAAAGTAAGGGATAAGGATATTTTCTTAGAACCTGAGGGGAGAGAACTTGATGA
GATTTTAAAACAACTCATATTAAACGGCAATAGAATATTTAAATTTGTAGAAGTACAAAAATCTCTTGAAGAAATATTTC
TTGACCTTACTGAGGGAGGAGAAAATATATGA

Protein sequence :
MSQEILQTKNLTKNFKDFKAVKGIDLSIKKGRVYGFLGPNGAGKSTTIRMLLGLIKPTKGEVKIFGKDLRKNRMSILKKI
GSMVEAPSYYGNLTAYENLQVTAELLELDHKYIDEVLKVVKLTEWKDRQASKFSLGMKQRLGIAQALISKPELLILDEPT
NGLDPSGIHEIRGLIKELPKLYNMTVIISSHNLSEIELIADDIGIINRGKMLFQGTLEELHSKSKGQICIESKDLKKLEG
TLNNSGYKYKVRDKDIFLEPEGRELDEILKQLILNGNRIFKFVEVQKSLEEIFLDLTEGGENI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cdd4 CAA63569.1 - Not tested PaLoc Protein 5e-69 52
SPN23F_09830 YP_002510959.1 lantibiotic transport ATP-binding protein Not tested PPI-1 Protein 3e-39 48
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 2e-54 44
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 3e-33 44
SSU05_0946 YP_001198312.1 hypothetical protein Not tested 89K Protein 4e-45 41
SSU98_0954 YP_001200512.1 hypothetical protein Not tested 89K Protein 4e-45 41