Gene Information

Name : CLJU_c13470 (CLJU_c13470)
Accession : YP_003779517.1
Strain : Clostridium ljungdahlii ATCC 49587
Genome accession: NC_014328
Putative virulence/resistance : Resistance
Product : transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG3682
EC number : -
Position : 1448571 - 1448942 bp
Length : 372 bp
Strand : +
Note : -

DNA sequence : 
ATGGCAAATATACCCAAAATATCTGAATCAGAGTGGGAAGTAATGAAAGTCATATGGAATAAAAATCCATGTTCGGCAAA
TGAAATAATAAAGCAATTGGAAGATAGTACAAGTTGGAAACCTAAGACAGTTAAATCACTTATAAGCAGACTTTTAAAGA
AAAATGTAATTGGATTTAATGAGGAGGGCAGAACTTATTATTATTATCCTCTATTTGATGAAAAAGAATGTGCAAGACAG
GAGAGCAGTTCTTTTATTAAAAGAGTATACAACGGTGCTGCTAAGAATATGTTATTGAATTTTATAGAAGACAATAAATT
GACAGAAGAGGATTTAGACGATTTAAAAAAAATATTAAATGATAGGGATTAG

Protein sequence : 
MANIPKISESEWEVMKVIWNKNPCSANEIIKQLEDSTSWKPKTVKSLISRLLKKNVIGFNEEGRTYYYYPLFDEKECARQ
ESSSFIKRVYNGAAKNMLLNFIEDNKLTEEDLDDLKKILNDRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mecI YP_005754043.1 methicillin resistance regulatory protein MecI Not tested Type-XI SCCmec Protein 3e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLJU_c13470 YP_003779517.1 transcriptional regulator CP001581.1.gene771.p Protein 2e-32 57
CLJU_c13470 YP_003779517.1 transcriptional regulator AM180355.1.gene595.p Protein 2e-27 44
CLJU_c13470 YP_003779517.1 transcriptional regulator FR823292.1.gene6.p01 Protein 1e-22 41