Gene Information

Name : CLJU_c01070 (CLJU_c01070)
Accession : YP_003778307.1
Strain : Clostridium ljungdahlii ATCC 49587
Genome accession: NC_014328
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 100803 - 101477 bp
Length : 675 bp
Strand : +
Note : -

DNA sequence : 
ATGAAGGTATTGGAAGTAAAATCTCTAAAAAAATATTATGGGAAAGATGAGAATTTAGTTAAAGCAGTCGATAATGTAAG
TTTTTTTGTAGATGAAGGGGAGTTTGTTGTAATAATTGGTACATCAGGTTCAGGTAAGAGTACACTGCTTCACATGGTTG
GAGGTCTTGATAAACCAACATCAGGGGAAGTTTATATTGTAGGACAGAATATATTTTCAATGAAGGATGATAAGCTTGCC
ATATTTAGAAGAAGAAATATAGGTTTTGTTTTTCAAGCATATAATCTTATACCTGTCTTAAATGTGTGGGAAAACATAAC
ACTCCCAATAGGACTTGATGGTAAAGAGGTAGATGAAAGTTATGTTAAAGAACTTATGGAAACTTTGAATATATATAATA
AGAAAAATTCACTGCCAAATGCCCTGTCAGGTGGGCAGCAGCAGAGAACGGCTATATGTAGAGCTCTTGCAGCTAAACCT
TCTATAATACTTGCAGATGAACCTACAGGAAATCTTGATTCCAAGACAGCGCAAGAAGTTATGGCGCTCTTGAAGATGTC
AGTAAAAAAATATCATCAAACTCTAATTATGATAACTCATGATGATAAAATTGCACAGATGGGTGATAGAGTGATTAGAA
TTGAAGACGGAAAAATAGTGCAAGGGAGGGAGTAA

Protein sequence : 
MKVLEVKSLKKYYGKDENLVKAVDNVSFFVDEGEFVVIIGTSGSGKSTLLHMVGGLDKPTSGEVYIVGQNIFSMKDDKLA
IFRRRNIGFVFQAYNLIPVLNVWENITLPIGLDGKEVDESYVKELMETLNIYNKKNSLPNALSGGQQQRTAICRALAAKP
SIILADEPTGNLDSKTAQEVMALLKMSVKKYHQTLIMITHDDKIAQMGDRVIRIEDGKIVQGRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-35 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-36 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-36 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-36 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLJU_c01070 YP_003778307.1 ABC transporter ATPase CP001581.1.gene598.p Protein 8e-69 61
CLJU_c01070 YP_003778307.1 ABC transporter ATPase CP001581.1.gene798.p Protein 5e-63 59
CLJU_c01070 YP_003778307.1 ABC transporter ATPase NC_012469.1.7686878. Protein 3e-37 42