Gene Information

Name : CLJU_c01050 (CLJU_c01050)
Accession : YP_003778305.1
Strain : Clostridium ljungdahlii ATCC 49587
Genome accession: NC_014328
Putative virulence/resistance : Resistance
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 98780 - 99472 bp
Length : 693 bp
Strand : +
Note : CheY-like and HTH domains

DNA sequence :
ATGAAAAGTATTTTATTGGTAGAAGATGATAAATCATTAAATAGGGGAATTAGCTTTAAATTAAGTAAAGAAGGATATAA
GGTTTTTTCATCAAGAACTATTGAAGAAGCAAAAATAATATTAGCAGAAAATAGTGTTGACCTTATGATCCTTGATGTAG
GCTTGCCCGATGGGAATGGATTTGATTTATGTGGGGAAGTTAGGAAAAAAAATGACTTACTTATTATATTCTTAACGGCC
TGTGATCAAGAAATTGATATTGTAACAGGACTTGATATGGGAGCAGACGATTATATAGCCAAGCCATTTAGTCTTATGGT
ATTAATGTCTAAGATAAATGCTCTACTTCGAAGAAATTCTAATAAAAATCAAAGCAAAAAAATCGTATCCGGAGATATAG
TTTTTTCTATAACGGATATGAAAGTGTTAAAAAACGAAGAGGAATTATTTCTAAGTAAGACTGAAATAAAACTTTTAAAG
TATTTAATGGATAATGCAGGACAAATCATAACCAAAGATCAGCTTTTAAATAAATTATGGGACATAGATAACACATTTGT
AGATGACAATACTATAGCGGTAAATATAAGAAGACTTAGAGAAAAAATAGAGGATAATCCTTCAAAGCCTAAATATATAA
AGAATGTTAGGGGAATGGGGTATATATGGATAGAAGGATGTGTAAAGATATGA

Protein sequence :
MKSILLVEDDKSLNRGISFKLSKEGYKVFSSRTIEEAKIILAENSVDLMILDVGLPDGNGFDLCGEVRKKNDLLIIFLTA
CDQEIDIVTGLDMGADDYIAKPFSLMVLMSKINALLRRNSNKNQSKKIVSGDIVFSITDMKVLKNEEELFLSKTEIKLLK
YLMDNAGQIITKDQLLNKLWDIDNTFVDDNTIAVNIRRLREKIEDNPSKPKYIKNVRGMGYIWIEGCVKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sboR YP_006309915.1 SboR Not tested FWisland_1 Protein 4e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLJU_c01050 YP_003778305.1 response regulator CP001581.1.gene596.p Protein 5e-40 41