Gene Information

Name : fliP (CLJU_c10340)
Accession : YP_003779204.1
Strain : Clostridium ljungdahlii ATCC 49587
Genome accession: NC_014328
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 1142971 - 1143771 bp
Length : 801 bp
Strand : +
Note : -

DNA sequence : 
ATGATGAACAGAAGAGATAAAAAGATTTTTATAACTATTTCAATTTTAATATTTGTCATTCTTGTTTTCAAAGCACATAG
TGTATATGCAGCTCCAGATGCATCACAGACGATGCCTATACCAAATATAAATGTATCTATGGATAATGCAGGTACTTCTA
CTCCACAGCAGTATGTACAAAATATAAAATTGCTTATATTTCTGACAGTTATAACATTGCTTCCATCTTTTGTAATGATG
ATGACGAGTTTTGTAAGAATTATAGTGGTATTTGGTTTTTTAAGAAGTGCTATGGGAACACAGCAGTCCCCCCCAAATTC
AATTTTGATTGGACTTGCACTATTCATGACAGTTTTTATTATGTATCCTGTTTATTCAAAAATGAATACAAATGCCATTG
AGCCCTACATGCAAAATAAAATAACCCAGCAGCAGGCAATAGATGAAGGGGCTAAACCAATTAGGAGTTTCATGCTTAAG
CAGACATATAAAAAGGATTTACAGTTATTCATAGACCAAGCTAAATTAAATTACAAGGTTACTGCAGATGGACAAAATGC
ACCACTCTATGTAGTAGTTCCGGCCTATATGATAAGTGAGCTTAAAACTGCCTTTGAAATAGGATTCTTAATTTATATAC
CGTTTATGGTAATAGATATGGTGGTATCAAGTGTACTTATGGCCATGGGAATGTTCATGCTCCCACCAACTATGATATCT
CTGGCATTTAAACTACTTTTATTTGTAATGGTAGATGGATGGTATTTACTTGTAAAATCTTTAATTGTAAGTTTTTCATG
A

Protein sequence : 
MMNRRDKKIFITISILIFVILVFKAHSVYAAPDASQTMPIPNINVSMDNAGTSTPQQYVQNIKLLIFLTVITLLPSFVMM
MTSFVRIIVVFGFLRSAMGTQQSPPNSILIGLALFMTVFIMYPVYSKMNTNAIEPYMQNKITQQQAIDEGAKPIRSFMLK
QTYKKDLQLFIDQAKLNYKVTADGQNAPLYVVVPAYMISELKTAFEIGFLIYIPFMVIDMVVSSVLMAMGMFMLPPTMIS
LAFKLLLFVMVDGWYLLVKSLIVSFS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 1e-32 41
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 1e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_003779204.1 flagellar biosynthesis protein FliP VFG2016 Protein 8e-56 52
fliP YP_003779204.1 flagellar biosynthesis protein FliP VFG2338 Protein 2e-50 48
fliP YP_003779204.1 flagellar biosynthesis protein FliP VFG1259 Protein 4e-57 47
fliP YP_003779204.1 flagellar biosynthesis protein FliP VFG2494 Protein 4e-50 46
fliP YP_003779204.1 flagellar biosynthesis protein FliP VFG0394 Protein 9e-33 44