|
Name : Hsero_0992 (Hsero_0992) Accession : YP_003774417.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Unknown Product : metal ion ABC transporter periplasmic protein/surface antigen protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1464 EC number : - Position : 1093677 - 1094474 bp Length : 798 bp Strand : - Note : - DNA sequence : ATGAAGCGTCGTCAGTTGATTCAATTCATCGCAGGCCTGGGCCTGGCCGCCGGCCTGGTCTCGGCTCCCGCCTTCGCGCA GGACCAGATCAAGATGGGCGTGACCGCCGGTCCCCACGCCGAGATCATGGAGCAGGTCAAGAAGCTGCTGGAAAAAGACG GCGTGCAGATGAAGGTCATCGAATTCACCGACTACATCCAGCCCAACGCCGCCCTGGCCGCCGGCGACCTGGACGCCAAC TCCTACCAGCACCAGCCCTACCTGGATGCGCAGATCAAGGACCGCGGCTACAAGTTCGTCAGCGTGGGCAGCACCATCAC CTTCCCGATGGGCGTGTACTCCAAGAAGATCAAGTCCCTGAACGACCTCAAGCAAGGCGCTCGCGTCGGCGTGCCCAACG ATCCCACCAACGGTGGCCGCGCCCTGCTGGTGCTGCAAGCCAAGGGCGTGATCAAGCTCAAGGCCGATGCCGGCCTGAAG GCCACCCCGCTGGACATCGTCGAGAACCCCAAGAAGATCAAGATCGTCGAACTGGACGCCGCCCAGCTGCCGCGTTCGCT GGATGACTTCGACGCTGCCGTCATCAATGGCAACTACGCTGAATCGGCCGGCCTGTCGCCGACCAAGGATGCGATTGCCG TGGAAGCCTCCACCGGCCCCTATGCCAACGTGATCGCCGTGCGCATCGCCGACAAGGACAAGCCCTGGGTCGCCAAGCTG GTCAAGGCCTACCACAGCCCGGAAGTGAAGAAGTTCGTGCTGGAGAAGTACAAGGGCTCCGTGATCACCTCCTGGTAA Protein sequence : MKRRQLIQFIAGLGLAAGLVSAPAFAQDQIKMGVTAGPHAEIMEQVKKLLEKDGVQMKVIEFTDYIQPNAALAAGDLDAN SYQHQPYLDAQIKDRGYKFVSVGSTITFPMGVYSKKIKSLNDLKQGARVGVPNDPTNGGRALLVLQAKGVIKLKADAGLK ATPLDIVENPKKIKIVELDAAQLPRSLDDFDAAVINGNYAESAGLSPTKDAIAVEASTGPYANVIAVRIADKDKPWVAKL VKAYHSPEVKKFVLEKYKGSVITSW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nlpA | AAW51766.1 | NlpA | Not tested | AGI-3 | Protein | 9e-47 | 43 |
| SAAV_0786 | YP_003281709.1 | ABC transporter substrate-binding protein | Not tested | SaPIAv | Protein | 1e-34 | 41 |
