Gene Information

Name : Hsero_0930 (Hsero_0930)
Accession : YP_003774355.1
Strain : Herbaspirillum seropedicae SmR1
Genome accession: NC_014323
Putative virulence/resistance : Unknown
Product : cobalamin synthesis P47K protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG0523
EC number : -
Position : 1014058 - 1015299 bp
Length : 1242 bp
Strand : -
Note : nitrile hydratase region 3-Protein

DNA sequence :
ATGAACGAACCGGCGCCCGAGGTATTGCTCAATGCTCAGGCGCAGAGGATCCCGGTGACGGTGTTATCGGGATTTCTCGG
ATCTGGCAAGACCACCTTGCTCAACCATATCCTGCGCAACCGGGCAGGAATGAAAGTGGCGGTCATCGTCAACGACATGA
GCGAAGTCAACATGGATGGCGACGATGTACGGCGCAATACCGAACTCTACCGCGGCAATGACGAACTGGTGGAGATGAGC
AATGGCTGCATCTGCTGCACCTTGCGCGCCGACTTGCTGGAGCAGGTCAGCGCACTGGCAAGGTCGGGCCGTTTCGATTA
TCTGCTGATCGAATCGACCGGCATTTCCGAGCCCATTCCGGTGGCGGAAACCTTTGCATTTCTCGACAGCGATGGTTTCA
GCCTGAGCGAGCTGGCGCGACTGGACACACTGGTCACGGTGGTCAACGGCGAGACGTTCGAACAGCAATTGGCTGACCAC
GTCGCCATTGCCCAGGCCGATGGCGCCAGCACGCGCCCGCTTTCCGACCTGCTCATCGAGCAGGTCGAGTATGCCAACGT
GATCCTGGTCAGCCGTGTCGACCTGATCGACGCCAGCGCCTTCGCCTCGCTCAAGGCAGTGCTGCAGAAGCTCAATCCGA
CTGCACGGATTCTGCCGATGGCGCACGGCGAGGTCGATCTGGATCAGGTACTCGATACCAGACTGTTCGATCTGCCCAGC
TTGGCCCGCATGCCAGGATGGATGCAGACCATGGATGGCGCCCACCCGCCTTCCGAGGCCGACACCTACGGCATCTCTTC
CAGCGTCTATCGCGCACGACTGCCCTTTCATCCCGGCCGCCTGCTGGACTGGCTCGGACGTCCTTGGCGCAATGGCCGCC
TGCTGCGCTGCAAAGGCTATCTCTGGATCTCCAGCAGATATTCCGACATTGCCCTGCTGGTCCAGACCGGCGGCCAGTTC
CAGTGGGGCTTCGTGGGCCGCTGGTGGCGTTTCATCGAGCCGGCCCAATGGCCGCAGGACACCTATCGCCGGCAAGGCAT
CCAGGAAAAGTGGGACGCATTGGCGGGCGACTGCCGACAGGAACTGGTCTTCATCGGCCAAGGCATCGATGGGGACTTGC
TGACCGAGGAGCTCGACGCCTGCCTGCTTACCACCACCGAAATCGAAGCCGGTCCGGATGCCTGGGCGCAGCTATACGGT
GCGGCCGCGTTCGACGAGCGCGCCAGTACCACTTTGCATTGA

Protein sequence :
MNEPAPEVLLNAQAQRIPVTVLSGFLGSGKTTLLNHILRNRAGMKVAVIVNDMSEVNMDGDDVRRNTELYRGNDELVEMS
NGCICCTLRADLLEQVSALARSGRFDYLLIESTGISEPIPVAETFAFLDSDGFSLSELARLDTLVTVVNGETFEQQLADH
VAIAQADGASTRPLSDLLIEQVEYANVILVSRVDLIDASAFASLKAVLQKLNPTARILPMAHGEVDLDQVLDTRLFDLPS
LARMPGWMQTMDGAHPPSEADTYGISSSVYRARLPFHPGRLLDWLGRPWRNGRLLRCKGYLWISSRYSDIALLVQTGGQF
QWGFVGRWWRFIEPAQWPQDTYRRQGIQEKWDALAGDCRQELVFIGQGIDGDLLTEELDACLLTTTEIEAGPDAWAQLYG
AAAFDERASTTLH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0450 YP_039898.1 cobalamin synthesis protein Not tested vSa¥á Protein 7e-76 45
SAS0408 YP_042534.1 cobalamin synthesis protein Not tested vSa¥á Protein 5e-76 45