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Name : Hsero_0910 (Hsero_0910) Accession : YP_003774335.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Unknown Product : bacteriophage capsid portal protein Function : - COG functional category : R : General function prediction only COG ID : COG5518 EC number : - Position : 997557 - 998609 bp Length : 1053 bp Strand : + Note : - DNA sequence : ATGAAACACAGAGCACGCCGCCACGCGGCTGCACCCGCCAGTACGCCGCCGGCCACTGTCGAGACAACGCCGGCGCCATC CGTCGAGGCCTTTAGCTTTGGTGATCCATCGCCGGTGCTGGAAGGCCGCGACATGCTGGCCGATATCGAGTGCTACCGCA ATGGTGATTGGTACGAGCCGCCCTTGAGCACGGTCGGCCTGGCCAAGTCCTTGAATGCCAGCGTCCACCATGCCAGCGCC ATCTGGTGCAAGGTCAATATCCTGTCCTCGACCTTCCGACCGTCCGCCGCTCTCAGCCGCGCGGAATTCACGCGTCTAGC CCTCGATTTTCTGCTGTTCGGCAACTGCTATGCAGAGCGCCGCGAAAGCATGACGGGCAAGCTGTTGAGCCTGAAGCATG CGCTGGCGAAATACACACGCGTGGGCGTCGAGCCGGGGCGGTATTTTTTCGTGAACGGCTGGCGTGCGAGCTACGAGTTT GAGCCTGGCTCCGTCTGGCATCTGCAAGCCCCGGACATCAACCAGGAAGTGTATGGCGTGCCGCAGTACGTGAGCGCGCT GCAATCGGCCTGGCTCAACGAGTCCGCCACGCTGTTCCGCCGCCGCTACTACCTCAACGGGTCACATGCGGGCTTCATCC TCTACATGACCGACACGGCCAGCAACGTGAATGACGTGGACAAGCTGCGCGAAGCCCTGCGCAACAGCAAGGGGCCGGGC AATTTCCGCAACCTGTTTGTGTATGCGCCGGGCGGCAAGAAGGATGGGCTGCAGATCCTACCGGTCTCCGAGATCGCGGC CAAGGATGAATTTTTCAACATCAAGAATTGCACGCGCGATGACGTGCTCGCTGCACATCGTGTGCCGCCGCAGTTGCTGG GGACCATGCCTAACAACACCGGGGGATTTGGCGACGTGACCAAGGCCGCCGCCGTCTTCGGCTGCAACGAAATCGAGCCG CTGCAGGCGCAGTTCCTTTCCCTGAATCAATGGGCTGGCGAGGATGTCGTCAGCTTCCGCCCCTATCAACTTCCCACTAC TGAGAGCAAATAA Protein sequence : MKHRARRHAAAPASTPPATVETTPAPSVEAFSFGDPSPVLEGRDMLADIECYRNGDWYEPPLSTVGLAKSLNASVHHASA IWCKVNILSSTFRPSAALSRAEFTRLALDFLLFGNCYAERRESMTGKLLSLKHALAKYTRVGVEPGRYFFVNGWRASYEF EPGSVWHLQAPDINQEVYGVPQYVSALQSAWLNESATLFRRRYYLNGSHAGFILYMTDTASNVNDVDKLREALRNSKGPG NFRNLFVYAPGGKKDGLQILPVSEIAAKDEFFNIKNCTRDDVLAAHRVPPQLLGTMPNNTGGFGDVTKAAAVFGCNEIEP LQAQFLSLNQWAGEDVVSFRPYQLPTTESK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4628 | NP_458710.1 | probable capsid portal protein | Not tested | SPI-7 | Protein | 1e-89 | 58 |
| t4321 | NP_807917.1 | capsid portal protein | Not tested | SPI-7 | Protein | 1e-89 | 58 |
| unnamed | ABR13463.1 | predicted capsid packaging protein | Not tested | PAGI-6 | Protein | 1e-79 | 56 |
