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Name : Hsero_0909 (Hsero_0909) Accession : YP_003774334.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Unknown Product : DNA-dependent ATPase terminase subunit Function : - COG functional category : S : Function unknown COG ID : COG5484 EC number : 3.6.3.- Position : 995776 - 997557 bp Length : 1782 bp Strand : + Note : - DNA sequence : ATGTTAGACATTCCACACGACATCAAGGAAAGCATCGACCAGGCGGCCGAGCCACGACACGTTGCGCGCCGCTTGTATTT CGAGGGCTGGCGAATCTCGTCCATCGCGCGGCATCTGAAGATCAAGCGCACGACGGTCAATAGCTGGAAGCACCGCGATG AGTGGGAAAAGGTCTCGCGCCTGGAGCGCGTAGAGATTGCCCTTGAAGCGCGCATAGTGCAACTGATCGGAAAGGAAGTA AAGGGCAACGGCGAGTACAAGGAACTCGACGCGCTGATGCGCCAACTGGTGCAAGCTGCGCGCGTACGCCGCTATGAGCA ACCGGGCGGCAATGAAACCGATCTAAATCCGAACATCGCCAATCGCAATGCCGCGCCGAAGAAAAAGCCGGTGCGCAACG AGTTCAGCGAAGAGGCACAGCAGCGCATCATTGAGGCTTTCAACGATTCGCTGTTCGACTACCAAAAGGTCTGGTTCCGT AATGGCAGCGAGCGCACGCGGATTATCCTGAAGTCACGCCAGATCGGTGCGACGTGGTATTTCGCACGCGAGGCGCTGAT TGATGCGATCCAGACCGGGCGCAATCAGATTTTTCTCTCGGCCTCGAAGTCGCAGGCCCACGTTTTCAAGCAATACATCA TCCAGTTTGCGAAGGACGCGTGCGGGGTGGAGCTGTCAGGCGATCCCATCGTGCTGCCCAATGGGGCGCACCTGTATTTC CTCGGCACGAACGCGCGCACCGCCCAGGGCTATCACGGCAATTTCTATTTCGACGAGTTCTTCTGGACGCACAACTTCAC CGAGCTGAACAAGGTCGCGTCCGGCATGGCCCTGCACAAGAAATGGCGGAAAACCTATTTCTCGACACCATCGGCCACCA CGCACCAAGCCTATTCATTCTGGACCGGTGAGGCATTCAACAAGCGCCGGGCCAAGGGCGACAAGGTCAACATCGATGTC AGCCACAAGCGTTTGTCTTCCGGCTTCACCGGCGAGGACAAGATATGGCGCCAGATCGTCACGATCATGGACGCGGCGGC AGGCGGGTGCGATCTGTTCGACATCGACGAGCTACGCGATTTCGAATACTCGCCCGATCAGTTCGACAACCTGCTGATGT GCAATTTCATCGACGATTCTGCGTCGGTGTTCCCGCTGGCCGACCTGCAGCGCGGCATGGTGGATTCCTGGGTGGATTGG GATGACTACAAGCCGTTCACGGCGCGGCCCTTTGGGCATCGCCCCGTCTGGATCGGCTATGACCCCTCACTGACGGGCGA CAGCGCCGGCTGCTCGGTGATTGCGCCGCCGCTGATCCCTGGCGGCAATTTCCGCATTCTGGAGCGCCACCAGTGGCGCG GCAAAGACTTTGCCGAGCAAGCCGCTCTCATCAAGGAAATGTGCGGCCGCTACAACGTCCAGTACATCGGCATCGACACG ACCGGCATGGGCGTGGGCGTCTATCCGCTGGTGAAACAGTTTTTCCCGGGCGTGACCGCTATCAGCTATTCGCCGGAAGT CAAAACGCGCATGGTGCTCAAGGCACAAAACATCATCCGCAGCGGCCGCCTGCAGTTCGATGCTGGCTGGACTGACATCG CGCAGTCCTTCATGGCCATTCGCAAAATTCTCACGCCCAGCGGTCGCGCCGTCACCTATGACGCCGGCCGCTCGGAAGAA ACCGGCCACGCCGATTTGGCCTGGTCGGTCATGCACGCCCTCGACTATGAACCCTTCGAAGGGACCACCGCTAACAACAC CTCATCTATGGAGTTCTTCTGA Protein sequence : MLDIPHDIKESIDQAAEPRHVARRLYFEGWRISSIARHLKIKRTTVNSWKHRDEWEKVSRLERVEIALEARIVQLIGKEV KGNGEYKELDALMRQLVQAARVRRYEQPGGNETDLNPNIANRNAAPKKKPVRNEFSEEAQQRIIEAFNDSLFDYQKVWFR NGSERTRIILKSRQIGATWYFAREALIDAIQTGRNQIFLSASKSQAHVFKQYIIQFAKDACGVELSGDPIVLPNGAHLYF LGTNARTAQGYHGNFYFDEFFWTHNFTELNKVASGMALHKKWRKTYFSTPSATTHQAYSFWTGEAFNKRRAKGDKVNIDV SHKRLSSGFTGEDKIWRQIVTIMDAAAGGCDLFDIDELRDFEYSPDQFDNLLMCNFIDDSASVFPLADLQRGMVDSWVDW DDYKPFTARPFGHRPVWIGYDPSLTGDSAGCSVIAPPLIPGGNFRILERHQWRGKDFAEQAALIKEMCGRYNVQYIGIDT TGMGVGVYPLVKQFFPGVTAISYSPEVKTRMVLKAQNIIRSGRLQFDAGWTDIAQSFMAIRKILTPSGRAVTYDAGRSEE TGHADLAWSVMHALDYEPFEGTTANNTSSMEFF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13464.1 | predicted ATPase terminase subunit | Not tested | PAGI-6 | Protein | 0.0 | 65 |
| STY4627 | NP_458709.1 | probable terminase subunit | Not tested | SPI-7 | Protein | 8e-169 | 61 |
| t4322 | NP_807916.1 | terminase subunit | Not tested | SPI-7 | Protein | 7e-169 | 61 |
