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Name : Hsero_0884 (Hsero_0884) Accession : YP_003774309.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Unknown Product : bacteriophage-related tail D protein Function : - COG functional category : R : General function prediction only COG ID : COG3500 EC number : - Position : 976834 - 978063 bp Length : 1230 bp Strand : - Note : - DNA sequence : ATGACGACTACCGCACCGGCGTTTCGCATCATCATCGAAGAAAAGGACATCAGCCGACCGGTTTCGGATCGGCTCATCAG CATCACCCTGCGCGAGTGCAGAGGTGATGAAGCTGACCAGCTCGATATCGAGTTGGACGATGGCGACGGCAAGCTGAAGA TTCCGCCCATGGGGGCCAAGCTGTCTTTCGCCCTGGGCTGGCAGGGCTCCCCGCTGGTGGACAAAGGCGCGTTCGTCGTT TCTGAGGTGGAGCATAGTGGTTCGCCGGATCGCATCACCATTCGGGCCAGGTCGGCCAGCATGATCGATGCATTTCGGCA GCAACGCGACCGCAGCTTCCATGAAACCACACTCGGCGCCGTGGTGGATGCCGTGGCCGCCAGCAATGGTCTGGCGTCCG GAATATCGGCCAGCCTGCGGGCCATCGCCATCAAGCACCTGGACCAGACGCACGAAAGCGACTCGGCGCTGCTGCGTCGC CTGGGCAAGAAATACGACGCGGTGGCCACGGTCAAGAATGACACTTTGCTTTTCATGCCGATCAATGACAGTCGCACGGC CAGCGGAAAGCCGCTGCCGGTGGTCAAGGTGGTGCGGGCGCTGGGCGATCAGCACCGCTATCACAGCTCGGAATCTGATG CGTATAGTGGAGTTCGTGCGTTCTGGATGGATGAGAAGTATGGGCGCCGTCGCAGCGTCGTCGCTGGCCAGGCCGGCAAC AGCAAGCGTCTGCGTACGACGTTTGCGAATGAAGCCGATGCGCGCACCGCAGCCGTAGCCGAATGGCAGAGGATTGAGCG CGGCTTGGCCACGTTCGAAATGCAGCTTGCGCTGGGGGATGCGCGCATCATGCCGCAGTCGCCTGTGGTGGTGAGCGGAT TCAAGGCCGACATCGATACGACGGAGTGGCTATCGAAGACGGTCACGCATTCCATCAACGGAAATGGATTCACCACGCGC ATCGAGTTCGAAACAAAATCTGAGGTAGCCGATACCGAGTGCGAGCTGGATCACGACCCGGAGGAAGGCATCACCGGAGT AAAAGCAGAGTGGCACGACAAAGCAAACAAGAAAAACAACAGAGGCACCGAGCTGGCAGGCAAGGCCGACAACGCCAAGA CACTGAAACGGACCTATGCCTCCAAGCAAAGTGCCAAACGTGCTGCCGCTCTGGAGTGGGCCAAAATCAAAGAGGTCCGC GAGATCATCGCGGAGAACAACACCGATTGA Protein sequence : MTTTAPAFRIIIEEKDISRPVSDRLISITLRECRGDEADQLDIELDDGDGKLKIPPMGAKLSFALGWQGSPLVDKGAFVV SEVEHSGSPDRITIRARSASMIDAFRQQRDRSFHETTLGAVVDAVAASNGLASGISASLRAIAIKHLDQTHESDSALLRR LGKKYDAVATVKNDTLLFMPINDSRTASGKPLPVVKVVRALGDQHRYHSSESDAYSGVRAFWMDEKYGRRRSVVAGQAGN SKRLRTTFANEADARTAAVAEWQRIERGLATFEMQLALGDARIMPQSPVVVSGFKADIDTTEWLSKTVTHSINGNGFTTR IEFETKSEVADTECELDHDPEEGITGVKAEWHDKANKKNNRGTELAGKADNAKTLKRTYASKQSAKRAAALEWAKIKEVR EIIAENNTD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4601 | NP_458684.1 | putative regulator of late gene expression | Not tested | SPI-7 | Protein | 3e-67 | 43 |
| t4295 | NP_807892.1 | regulator of late gene expression | Not tested | SPI-7 | Protein | 3e-67 | 43 |
