Gene Information

Name : rpmE (Hsero_0858)
Accession : YP_003774284.1
Strain : Herbaspirillum seropedicae SmR1
Genome accession: NC_014323
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein (type B) L31
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0254
EC number : -
Position : 948487 - 948756 bp
Length : 270 bp
Strand : -
Note : -

DNA sequence :
ATGAAAGAAGGCATCCATCCGGATTACCGCGAAGTCCTGTTCCACGACATGTCGAACGACTTCAAGTTCATCACCCGCTC
CACCATCGGCACGCGCGAAACCGCTGAGTTCGAAGGCAAGCAATATCCCCTGGTGAAGATCGAAGTGTCCTCCGAATCGC
ACCCGTTCTACACCGGCAAGCACAAGATCGTCGACACCGCTGGCCGCGTCGAGAAGTTCCGCCAGAAGTTCGGTTCCGTC
GGTTCGAAGACTGCTGTCTCGAAGGCGTAA

Protein sequence :
MKEGIHPDYREVLFHDMSNDFKFITRSTIGTRETAEFEGKQYPLVKIEVSSESHPFYTGKHKIVDTAGRVEKFRQKFGSV
GSKTAVSKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rpmE2 NP_286687.1 50S ribosomal protein L31 Not tested TAI Protein 3e-14 54
rpmE2 NP_287095.1 50S ribosomal protein L31 Not tested TAI Protein 3e-14 54