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Name : xerD (Hsero_0849) Accession : YP_003774275.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Unknown Product : site specific integrase/recombinase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 936894 - 937817 bp Length : 924 bp Strand : + Note : - DNA sequence : ATGGGACGCACCACACCAAAGATCGAGGCTCCGGCCGTGAGCCGTGAAGCCATCGACGAATTCTGCGACAGCCTGTGGCT GGAAGATGGCTTGTCCAAGAACACGCTGGAGGCCTACCGGCGCGACATGACCCGGTATGCCCACTGGCTCTACCAGGAGC GCGCCAAGGCCCTGTACGAGACGCAGGCCGAGGACCTCAACGCCTACTTTGCGGCGCGCCACGATCAGACCAAGCCCAGC TCTTCCAACCGCCGCCTGGCGGTGTTGAAACGGTTCTTCCAGCTGGCGCTGCGCCAGCATCACGTGGCCGCCGATCCCTG CCTGAAGCTGCGCTCGGCACGCCAGCCGCAGCGTTTTCCCAAGACCCTCTCGGAAGGCCAGGTCGAGGCCTTGCTGGCCG CGCCGGATGTGTCCACCCCGCTGGGATTGCGCGACCGCGCCATGATCGAGCTGATGTACGCCAGCGGGCTGCGGGTCTCG GAACTGGTGTTGTTGAAGAGTATCGAGGTGGGCATGAACGAGGGCGTCCTGCGCGTGACCGGCAAGGGCAGCAAGACCCG CCTGGTGCCGTTTGGCGAGGAAGCCGGCAGCTGGCTCATGCGCTACCTGGCCGAGGCGAGGGCGCAGATCCTGCAGGGGC AGGTCGACGATGCCTTGTTCGTGACCGCCCGCGGTGGCCCGATGACGCGCCAGATGTTCTGGACCCTGATCAAGAAATAT GCGCTGCAGGCGGGCGTGACGGCGCGCCTGTCGCCGCATACCTTGCGCCACGCCTTTGCCACCCACCTGCTCAACCATGG GGCCGACCTGCGCGTGGTGCAGCTGCTGCTGGGTCATGCCGACATCTCCACCACCCAGATCTATACCCACGTCGCCCGTG AGCGCCTCAAGCAACTGCATGCCGCACATCACCCCCGCGGCTGA Protein sequence : MGRTTPKIEAPAVSREAIDEFCDSLWLEDGLSKNTLEAYRRDMTRYAHWLYQERAKALYETQAEDLNAYFAARHDQTKPS SSNRRLAVLKRFFQLALRQHHVAADPCLKLRSARQPQRFPKTLSEGQVEALLAAPDVSTPLGLRDRAMIELMYASGLRVS ELVLLKSIEVGMNEGVLRVTGKGSKTRLVPFGEEAGSWLMRYLAEARAQILQGQVDDALFVTARGGPMTRQMFWTLIKKY ALQAGVTARLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLKQLHAAHHPRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 4e-59 | 57 |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 4e-59 | 57 |
