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Name : hrcU (Hsero_0797) Accession : YP_003774224.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Virulence Product : type III secretion HrcU transmembrane protein Function : - COG functional category : N : Cell motility COG ID : COG1377 EC number : - Position : 875333 - 876448 bp Length : 1116 bp Strand : + Note : - DNA sequence : ATGAGCGACGACAAGAACGAAGAACCGACCGACAAGAAGATCGAGGACGCCAAGAAGAAAGGGCAGATCGCCGTCAGCCG CGACCTGGCCCGGCTGGTGACGCTGGTGGCGGTGATGGAGGCGGCGCTGGCCGCTGACAGCCTGTGGCGCGGCGCGGTCT TCAATCTGATGGAGGGTGGGGTGCTGGGGGTGGGGCAGGATTTCCAGACTGCCATGAACAACCAGCTGACGGCGGCGCTG ATCTTACTGGCCGTGGCCTTCTTCGCGGTGCTGGTGATCTGCCCGCTGGCCGCCGTGGTCGGGCACTGGGGCCAATTCGG CATGCTCATCGCCACCGAGGCGCTGGAGCCCAAGCTGGACAAGTTGAACCCGGTCAACGGCATCAAGCAGATCTTTTCCA AGAAGAAGCTGGTCGAGCTCTTCATCACCGTGGGCAAGGCAGCCCTGATTGCCGGCATGATGTATAGCGCCATCCACAGC CAGCTGGGCGCCATCTTCACCTTGGCCGGGGGCGAACCCAAGGACGTCTATGAGGCCTTCGTGACGCTGTTGCGCAATAT CTTCCATCTCATCATCGTGGTCTGCCTGGTGCTTGGCGTGATCGATTACGCGGTGCAGAAATACTTCCACAAGAAGGACC TGATGATGGACCAGGAAGAGATCAAGCGCGAGTTCAAGGAATCCGAAGGCGACCCCATGGTCAAGGGACAGCGCAAGCAG CTGGCGCGCCAGTGGGCCAATGAAGCGCCGGCGGCCAAGACCGAGAAGGCCAACGCCGTGGTGGTCAACCCGACCCACTT CGCGGTGGCGATGTTCTATGACGCCGATGAGGCCATGGTGCCGCTAGTGCTGGCCAAGGGCCGCGACGAGATCGCCCAGG CAATGATCGCGCGCGCGCATGCCTGCGGCATCCCGGTGATCCGCCATGTCTGGCTGGCGCGCACGCTCTACGCCACCTGC CAGGACGACATGCCGGTGCCGCGCTCCAGTTACCAGGCCGTGGCGCAGGTCTATGCGGTGGTGCACGAGCTGGTCGCCAG CGGCGAAGTGCAGCGCGAAGTCGAACTGGAATCCCTGGGCGAGCCGCCCGAACGCGACACCCTCCCGAAAGGATGA Protein sequence : MSDDKNEEPTDKKIEDAKKKGQIAVSRDLARLVTLVAVMEAALAADSLWRGAVFNLMEGGVLGVGQDFQTAMNNQLTAAL ILLAVAFFAVLVICPLAAVVGHWGQFGMLIATEALEPKLDKLNPVNGIKQIFSKKKLVELFITVGKAALIAGMMYSAIHS QLGAIFTLAGGEPKDVYEAFVTLLRNIFHLIIVVCLVLGVIDYAVQKYFHKKDLMMDQEEIKREFKESEGDPMVKGQRKQ LARQWANEAPAAKTEKANAVVVNPTHFAVAMFYDADEAMVPLVLAKGRDEIAQAMIARAHACGIPVIRHVWLARTLYATC QDDMPVPRSSYQAVAQVYAVVHELVASGEVQREVELESLGEPPERDTLPKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcU | AAC35808.1 | hrp type III pathway protein | Virulence | Hrp PAI | Protein | 6e-39 | 42 |
