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Name : hrcS (Hsero_0795) Accession : YP_003774222.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Virulence Product : type III secretion HrcS protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4794 EC number : - Position : 874262 - 874525 bp Length : 264 bp Strand : + Note : - DNA sequence : GTGGCCGATACCATCAACTTTTTCCAGCAGAGCCTGTGGATGGCCATCATGATGTCGGCGCCGCCGCTGCTCATTGCCAC GCTGTGCGGGCTGGGCGTGTCGCTGATCCAGGCGGTGACCCAGATCCAGGACCAGACGCTGCCCTACGTGGTCAAGCTGG TGGCCGTGGCGGTGACGCTGGCCAGCATGGGCCGCTGGATCGGCGTGGAAATGTTGCGCCTGGCCGACCTGGCTTTCACC ATGGTGCCGGACATCGGACGCTGA Protein sequence : MADTINFFQQSLWMAIMMSAPPLLIATLCGLGVSLIQAVTQIQDQTLPYVVKLVAVAVTLASMGRWIGVEMLRLADLAFT MVPDIGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcS | AAB06006.1 | HrcS | Virulence | Hrp PAI | Protein | 6e-12 | 58 |
| hrcS | AAT96263.1 | HrcS | Virulence | S-PAI | Protein | 4e-10 | 49 |
| hrcS | AAT96304.1 | HrcS | Virulence | S-PAI | Protein | 4e-10 | 49 |
| hrcS | AAT96344.1 | HrcS | Virulence | S-PAI | Protein | 4e-10 | 49 |
| hrcS | ABA47280.1 | HrcS | Virulence | S-PAI | Protein | 9e-10 | 49 |
| lscS | AAO18039.1 | LscS | Virulence | TTSS locus | Protein | 4e-08 | 49 |
| hrcS | ABQ88360.1 | HrcS | Virulence | Hrp PAI | Protein | 2e-06 | 46 |
| hrpO | AAB05076.1 | HrpO | Virulence | Hrp PAI | Protein | 2e-06 | 46 |
| hrcS | AAG33885.1 | HrcS | Virulence | Hrp PAI | Protein | 3e-09 | 46 |
| hrcS | AAT96147.1 | HrcS | Virulence | T-PAI | Protein | 2e-09 | 46 |
| hrcS | NP_791221.1 | type III secretion protein HrcS | Virulence | Hrp PAI | Protein | 4e-09 | 46 |
| hrcS | AAT96201.1 | HrcS | Virulence | T-PAI | Protein | 2e-09 | 46 |
| escS | AFO66401.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 5e-06 | 41 |
| escS | AFO66341.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 5e-06 | 41 |
| unnamed | AAL06355.1 | EscS | Virulence | LEE | Protein | 8e-06 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hrcS | YP_003774222.1 | type III secretion HrcS protein | VFG0187 | Protein | 1e-08 | 49 |
| hrcS | YP_003774222.1 | type III secretion HrcS protein | VFG0395 | Protein | 6e-08 | 45 |
